Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20subrubescens_20[genbank_20GCA_5F001908125.1_202016-12- 19] 776 sequences; 39,803,164 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq195 134 3e-26 seq30 120 7e-22 seq670 102 2e-16 >seq195 Length=318951 Score = 134 bits (148), Expect = 3e-26 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| |||||||| | ||||||||||| || ||||| Sbjct 266442 TCACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGACAATGTCAAGT 266501 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || |||||||| |||||||| || || ||||||||||| | Sbjct 266502 CCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTGATCTTCGCCGGCA 266561 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| ||||| | || || |||| || ||| | || || || || || || | Sbjct 266562 AGCAGCTCGAGGATGGTCGTACCCTCTCCGACTACAACATTCAGAAGGAGTCTACTCTCC 266621 Query 178123 ATCTTGT 178129 | || || Sbjct 266622 ACCTGGT 266628 Score = 123 bits (136), Expect = 6e-23 Identities = 149/199 (75%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||||||||| || || |||||||||| Sbjct 266748 TCGTCAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGACACCATCG 266807 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| ||||| || || || || || || |||||||| || || | Sbjct 266808 ATAATGTCAAGTCGAAGATCCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGCCTGA 266867 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109 |||| || || || ||||| || ||||| | || |||| |||| || ||| |||| || Sbjct 266868 TCTTTGCTGGCAAGCAGCTGGAGGATGGCCGTAC-CTTGTCCGACTACAACATCCAGAAG 266926 Query 178110 GAATCAACACTGCATCTTG 178128 ||||| || ||||| |||| Sbjct 266927 GAATCCACCCTGCA-CTTG 266944 >seq30 Length=61855 Score = 120 bits (132), Expect = 7e-22 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 52219 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 52275 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 52276 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCG 52335 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 52336 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 52395 Query 178106 AAA 178108 || Sbjct 52396 GAA 52398 >seq670 Length=422265 Score = 102 bits (112), Expect = 2e-16 Identities = 189/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| ||||||||||| || | |||| ||||| ||||| ||||| || | || Sbjct 340082 GTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTACAACATGAAGGGGTTGCC 340026 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| ||||| | |||||| || ||| || | || ||||| | | ||| Sbjct 340025 AGTCTCGGTCTGAGCCTCGAGAATGGCATACCACAGCTTCTGAGCCTTGATGGTCTTACG 339966 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| || ||||| ||||| |||| ||||| || |||||||||||| Sbjct 339965 GCCACGGCCCTCCTTCTCGTAGCGCTCATACAGAGCGTCAAACTCATCACCGTAGACATC 339906 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 ||||||| || ||||||| |||||||| || |||| | || || || ||| | Sbjct 339905 GGCAAGACCAGGGGCCTCGTGAGGGCAGAACAGGGTCCAGTCACCGTTGGCCTCGACACG 339846 Query 214365 TTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAA 214400 |||||||| || |||| |||||| | ||||| || Sbjct 339845 CTTCATGAAGAGATCGGGAGTCCACAGGGCATAGAA 339810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203719231902544