Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1762 282 4e-71 seq681 118 9e-22 seq1668 95.1 1e-14 seq598 86.0 6e-12 >seq1762 Length=22727 Score = 282 bits (312), Expect = 4e-71 Identities = 646/963 (67%), Gaps = 12/963 (1%) Strand=Plus/Plus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||||| || || || || || || |||||||| || || ||||||| ||||| || Sbjct 4193 GGCGAGGGAAGCCAGGTTACAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTC 4252 Query 23080 GGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT 23136 || || || ||| |||| || || |||| || ||||||| || || || Sbjct 4253 AGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 4309 Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196 ||| | ||||||||||||||| | || | || ||||| ||| | ||| | || || Sbjct 4310 GCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGC 4369 Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTT 23255 ||| | ||||||| | | ||| || | | |||||| | ||||||||| Sbjct 4370 GTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCG 4428 Query 23256 GGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGA 23314 ||| | || || || || | ||||| ||| || ||||| ||||| | | | || Sbjct 4429 CGTAGAGAGCATCGAACTCATCGCCGTAGACA-TCAGCCAGACCGGGGGCCTCGTTGGGG 4487 Query 23315 CACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCAT 23374 || | ||| |||| || ||||| || |||| || ||||| || |||| Sbjct 4488 CAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCAC 4547 Query 23375 AGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCC 23434 | ||||||||| || || || ||||| |||||||| || ||| |||||| || ||| Sbjct 4548 AAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCG 4607 Query 23435 AAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTC 23494 | || || || || || || ||||||||||| ||||| | |||||| || || || | | Sbjct 4608 AGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGC 4667 Query 23495 TTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACG 23554 || ||||| ||||| ||||| || || || |||||||| |||| | |||||| || || Sbjct 4668 TTGTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGTAGCATAGGAACA 4727 Query 23555 AGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTG 23613 | ||||||||| | |||| | || ||| | ||||| | || |||| ||| Sbjct 4728 ATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTG 4786 Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673 || | | ||| || || || | | || || ||||| || ||| || ||||| || Sbjct 4787 GACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 4846 Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 |||||| ||||| ||||| || | | |||||| ||| || || | | || | Sbjct 4847 GTAGATACCCTCAATGCTATCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 4906 Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 | ||| |||||||| |||||| || || |||||| || ||||| | ||||| Sbjct 4907 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 4966 Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 || | ||| || || ||||| || || ||||| ||||| || |||| || || || Sbjct 4967 CAGGTGGTATGTCTCAATGGCTCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 5026 Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 ||||| || || ||||| | ||| | ||||||||| | || |||||||| Sbjct 5027 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 5086 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | | || || ||||| || ||| ||||| |||||||| |||| ||| |||||||| Sbjct 5087 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 5146 Query 23974 ATT 23976 || Sbjct 5147 GTT 5149 >seq681 Length=20543 Score = 118 bits (130), Expect = 9e-22 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGC 57967 || ||||||||||| | ||| | |||| ||||| || | || | | | || ||||| Sbjct 881 ATTGCCAAGAAGGCCAACTGGGCCCTCAAGTGGATCAACGACCGTGA-GTCAACCTTCGC 823 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| || || | Sbjct 822 TTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTC 763 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| | ||||| || ||||||||||| || || || || ||||||| |||| Sbjct 762 CATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGAT 703 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || || ||||||||||| ||||| || || || || ||| ||| ||||| Sbjct 702 CTCTCGTGATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACAT 649 >seq1668 Length=20715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || | || || || | ||| Sbjct 286 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 345 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | |||| | ||||| ||| || | | ||||||||| || | || || ||| Sbjct 346 GACACTATCGATAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGAC 402 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || |||||||| || ||| |||| ||| ||| | || || Sbjct 403 CAGCAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTAC 462 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || || ||||| || ||||| Sbjct 463 AACATCCAGAAGGAGTCCACTCTCCACCTGGT 494 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || ||||| ||||| | || ||||| | ||| | | ||| Sbjct 68 TCGTTAAGACCCTGACCGGAAAAACCATCACTCTTGAGGTTGAGTCCAGCGATACTATCG 127 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||| ||||| ||| | || ||||||||||||||||| | Sbjct 128 ACAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCA 187 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| ||| | || ||| ||| | || || ||||||||||| | Sbjct 188 TCTTCGCAGGCAAGCAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGG 247 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || || || || || || ||| | || | || |||| Sbjct 248 AGTCCACCCTCCACCTCGTGCTTCGTCTACGTGGTGGTA 286 >seq598 Length=6539 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||| || || || ||||| | Sbjct 2578 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 2637 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||||||||| ||| | || |||||||||||||||| Sbjct 2638 CGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTC 2696 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| || || ||| | || || || ||||||| || ||||| || | Sbjct 2697 TGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2756 Query 31380 A 31380 | Sbjct 2757 A 2757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445742958259440