Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1762 134 2e-26 seq681 111 2e-19 >seq1762 Length=22727 Score = 134 bits (148), Expect = 2e-26 Identities = 726/1148 (63%), Gaps = 28/1148 (2%) Strand=Plus/Plus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 || ||||| ||||| || || ||||||| || | || | | ||||||||||| Sbjct 4200 GAAGCCAGGTTACAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCAC 4259 Query 63009 AGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 63065 || || |||| ||||| || | || | || |||||||| ||||| || ||| Sbjct 4260 AGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCA 4316 Query 63066 TCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 63125 ||||| || || || || || ||||||| ||| |||| | || | ||| || | |||| Sbjct 4317 TCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAG 4376 Query 63126 ACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA--TAGAGT 63178 | | || ||||||| || | ||| | |||| || | |||| | | || Sbjct 4377 A-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTACTTCGCGT 4431 Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238 | | | |||||||| || || | |||| ||| | || || | || || Sbjct 4432 AGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCA 4489 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 | | | ||| || |||| ||| || || ||||| |||||||| || |||| | Sbjct 4490 GAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAA 4549 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 ||| || || || | | | | ||||| || || ||||| |||||||| Sbjct 4550 AGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAG 4609 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | ||| | |||||||| |||| ||| ||||| | | ||||| || || Sbjct 4610 GAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTT 4669 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 ||| || ||||| || | || | || ||||| ||| | || | | ||| |||| ||| Sbjct 4670 GTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGTAGCATAGGAACAAT 4729 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACTA 63536 |||||| || || ||||| || || || || | || |||||| | Sbjct 4730 ACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGAC 4789 Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63596 ||| ||||| || || || || | || ||||| | || ||| || | || || Sbjct 4790 ATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATCG 4847 Query 63597 TAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63656 ||||| || || ||||||||| || ||| | | || || || | | ||| | Sbjct 4848 TAGATACCCTCAATGCTATCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGGC 4907 Query 63657 CGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 63716 | | ||| | ||||| || | || ||||| ||||| || || | || | || | Sbjct 4908 TGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACATC 4967 Query 63717 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63776 || | ||| |||||||| ||| || |||||| || ||||| || || |||||| Sbjct 4968 AGGTGGTATGTCTCAATGGCTCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACGC 5027 Query 63777 ATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTT 63836 || | || ||||||||| | ||| ||| ||| ||| || | | ||| || Sbjct 5028 ATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGC 5087 Query 63837 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAA 63896 || | || || || || || ||||||| ||||| || ||||| | ||| |||| Sbjct 5088 TCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAG 5147 Query 63897 TTGAGCTTATCCTTATATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGAG 63954 ||||||| || | || | || || || ||| | | |||| || || |||| Sbjct 5148 TTGAGCTCCTCGGCGTGCTTCATTACAATCTCGTAATGTTCCT--TTGAGATCATAGGAG 5205 Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014 | | || || || || || || |||| | | | ||| || || | ||| Sbjct 5206 CAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATT 5265 Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074 | ||||| |||| |||||| || || || | ||| || | || || |||||||| || | Sbjct 5266 GCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGT 5325 Query 64075 CCGGATGT 64082 | || ||| Sbjct 5326 CGGGGTGT 5333 >seq681 Length=20543 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| ||||| || ||| |||||||| || | | || | ||||| || Sbjct 658 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 717 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| || Sbjct 718 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 777 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || ||||||| Sbjct 778 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629784479466960