Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1762 129 8e-25 seq681 116 5e-21 >seq1762 Length=22727 Score = 129 bits (142), Expect = 8e-25 Identities = 721/1144 (63%), Gaps = 20/1144 (2%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAATTTCAGTG 71760 || ||||| ||||| || || ||||||| || |||| || | | ||| |||||| Sbjct 4200 GAAGCCAGGTTACAGACAGCCACCTCATCAGG---GGCACTGTACTCGACAATCTCAGTG 4256 Query 71761 CAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 || || || |||| || || || | || | || |||||||| ||||| || Sbjct 4257 CACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 4313 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 4314 GCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 4373 Query 71878 CAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATA 71936 |||| | || ||||||| || | || | | ||| ||||| | | || Sbjct 4374 CAGA-GCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTA 4432 Query 71937 TAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACAT 71996 | |||||||| || || | ||| | | || || || || || || | Sbjct 4433 GAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAA 4492 Query 71997 CAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 72056 | | ||| || || | | | || || ||||| |||||||| || |||| | ||| Sbjct 4493 GAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGC 4552 Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116 || || || | | | | |||||| || || ||||| ||||||||||| Sbjct 4553 GTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 4612 Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176 | | | | ||| | |||||||| |||| ||| ||||| | | || || || ||||| Sbjct 4613 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTT 4672 Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 || ||||| || | || | || ||||| ||| | || | | ||| |||| |||||| Sbjct 4673 GCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGTAGCATAGGAACAATACC 4732 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTGCTAATT 72294 ||||| | || ||||| || || || || | || |||||| || ||| Sbjct 4733 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGACATT 4792 Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354 ||||| || || || || | || ||||| | || ||| || | ||||| ||| Sbjct 4793 --CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATCGTAG 4850 Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414 || ||||| || |||||| | ||| | | || || || | | ||| | | Sbjct 4851 ATACCCTCAATGCTATCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGGCTGG 4910 Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 ||| | ||||| || | || ||||| ||||| || || | || | |||| || Sbjct 4911 GGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACATCAGG 4970 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 | ||| |||||||| ||| || |||||| || ||||| || || |||||||| Sbjct 4971 TGGTATGTCTCAATGGCTCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACGCATC 5030 Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594 | || |||||||| | ||| | | ||| || || | | ||| || || Sbjct 5031 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGCTCG 5090 Query 72595 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654 | || || || || || ||||||| ||||| || ||||| | ||| |||| ||| Sbjct 5091 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTG 5150 Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 72713 || | || | || | || || | | | || | | |||| || || |||| | | Sbjct 5151 AGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCATAGGAGCAGG 5209 Query 72714 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 72773 || || || || || || |||| | | | ||| || || | ||| | || Sbjct 5210 CTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTGCTT 5269 Query 72774 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGG 72833 ||| |||| |||||| || || || ||||| || | || || |||||||| || || || Sbjct 5270 TTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 5329 Query 72834 ATGT 72837 ||| Sbjct 5330 GTGT 5333 >seq681 Length=20543 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 658 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 717 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 718 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 777 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || ||||||| Sbjct 778 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671103906467320