Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1668 116 9e-21 seq681 89.7 1e-12 >seq1668 Length=20715 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || ||||| | ||||| || || || || ||| Sbjct 482 GTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCA 423 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || |||||||| || || || || ||||| ||||| ||| || Sbjct 422 GCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTT-GCTCTT 364 Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || ||| | || || || |||||||||||||| ||||| || || Sbjct 363 GACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGT 304 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 303 CTTCACGAAAATCTGCAT 286 >seq681 Length=20543 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 812 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 753 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | ||||| | ||||| ||||| || | |||||||| ||||| |||| | || Sbjct 752 CTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAT 693 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| |||||||||||| Sbjct 692 GAGGGTCTCCACACTGACTTCGCTTGT 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151336337107556