Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2319 188 1e-43 seq3208 159 5e-35 >seq2319 Length=5315 Score = 188 bits (208), Expect = 1e-43 Identities = 204/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| |||| Sbjct 3454 CGCCAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGAATCACCAAGCCCGCTA 3512 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || |||||||| || ||||||||| |||| | || |||| || |||| Sbjct 3513 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCGATGATCTACGAGGAGA 3572 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| || || ||| |||| Sbjct 3573 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 3632 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 3633 AGCACGCTAAGCGTAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTTAAGCGCCAGG 3692 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| || |||| Sbjct 3693 GCCGTACCCTCTACGGTTTCGGTGGTTA 3720 >seq3208 Length=9288 Score = 159 bits (176), Expect = 5e-35 Identities = 187/250 (75%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 2227 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 2169 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 2168 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 2109 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || || Sbjct 2108 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 2049 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||| || || | || | ||||| || | || || || || Sbjct 2048 GCACGCCAAGCGCAAGACTGTTACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 1989 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 1988 CCGTAAGTTT 1979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071353510451