Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2319 188 1e-43
seq3208 159 5e-35
>seq2319
Length=5315
Score = 188 bits (208), Expect = 1e-43
Identities = 204/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| ||||
Sbjct 3454 CGCCAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGAATCACCAAGCCCGCTA 3512
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || |||||||| || ||||||||| |||| | || |||| || ||||
Sbjct 3513 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCGATGATCTACGAGGAGA 3572
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| |||||| || |||| |||| ||| || || ||| ||||
Sbjct 3573 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 3632
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| |||||||| ||||||||| | || ||||||| || | || || || |
Sbjct 3633 AGCACGCTAAGCGTAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTTAAGCGCCAGG 3692
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | || ||||| || ||||
Sbjct 3693 GCCGTACCCTCTACGGTTTCGGTGGTTA 3720
>seq3208
Length=9288
Score = 159 bits (176), Expect = 5e-35
Identities = 187/250 (75%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || ||||| |||||||| |||||
Sbjct 2227 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 2169
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 2168 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 2109
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || ||
Sbjct 2108 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 2049
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || |||||||| || || | || | ||||| || | || || || ||
Sbjct 2048 GCACGCCAAGCGCAAGACTGTTACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 1989
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 1988 CCGTAAGTTT 1979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071353510451
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |