Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1762 145 1e-29 seq681 125 9e-24 >seq1762 Length=22727 Score = 145 bits (160), Expect = 1e-29 Identities = 728/1147 (63%), Gaps = 26/1147 (2%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || ||||| ||||| || || ||||||| || | || | | ||||||||||| Sbjct 4200 GAAGCCAGGTTACAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCAC 4259 Query 62958 AGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 63014 || || |||| ||||| || | || | || |||||||| ||||| || ||| Sbjct 4260 AGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCA 4316 Query 63015 TCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 63074 ||||| || || || || || ||||||| ||| |||| | || | ||| || | |||| Sbjct 4317 TCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAG 4376 Query 63075 ACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA--TAGTGT 63127 | | || ||||||| || | ||| | |||| || | |||| | | || Sbjct 4377 A-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTACTTCGCGT 4431 Query 63128 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 63187 | | | |||||||| || || | |||| ||| || || || | || || Sbjct 4432 AGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCA 4489 Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 | | | ||| || |||| ||| || || ||||| |||||||| || |||| | Sbjct 4490 GAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAA 4549 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 ||| || || || | | | | ||||| || || ||||| |||||||| Sbjct 4550 AGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAG 4609 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | ||| | |||||||| |||| ||| ||||| | | ||||| || || Sbjct 4610 GAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTT 4669 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 ||| || ||||| || | || | || ||||| ||| | || | | ||| |||| ||| Sbjct 4670 GTTGCCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGTAGCATAGGAACAAT 4729 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA--TTACTA 63485 |||||| || || ||||| || || || || | || |||||| | Sbjct 4730 ACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGAC 4789 Query 63486 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCA 63545 ||| ||||| || || || || | || ||||| | || ||| || | || || Sbjct 4790 ATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATCG 4847 Query 63546 TAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63605 ||||||||||| ||||||||| || ||| | | || || || | | ||| | Sbjct 4848 TAGATACCCTCAATGCTATCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGGC 4907 Query 63606 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 63665 | ||| | ||||| || | || ||||| ||||| || || | || | || | Sbjct 4908 TGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACATC 4967 Query 63666 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63725 || | ||| |||||||| ||| || |||||| || ||||| || || |||||| Sbjct 4968 AGGTGGTATGTCTCAATGGCTCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACGC 5027 Query 63726 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTT 63785 || | || ||||||||| | ||| | | ||| ||| || | | ||| || Sbjct 5028 ATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGC 5087 Query 63786 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 63845 || | || || || || || ||||||| ||||| || ||||| | ||| ||||| Sbjct 5088 TCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAG 5147 Query 63846 TTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGA 63904 ||||| | || | || | || || | | | || | | |||| || || |||| Sbjct 5148 TTGAGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCATAGGAGC 5206 Query 63905 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 63964 | | || || || || || || |||| | | | ||| || || | ||| | Sbjct 5207 AGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTG 5266 Query 63965 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATC 64024 ||||| |||| |||||| || || || ||||| || | || || |||||||| || || Sbjct 5267 CTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTC 5326 Query 64025 CGGATGT 64031 || ||| Sbjct 5327 GGGGTGT 5333 >seq681 Length=20543 Score = 125 bits (138), Expect = 9e-24 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| || ||| |||||||| || | | || || |||||||| Sbjct 658 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 717 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||| Sbjct 718 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 777 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || ||||||| Sbjct 778 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622914440764120