Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3565 132 3e-26 seq1396 111 1e-19 seq3395 95.1 8e-15 seq1668 95.1 8e-15 >seq3565 Length=1458 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 708 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 767 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 768 ATCCATTCATGCGCGTCACTAATTAGATGACGA 800 >seq1396 Length=22836 Score = 111 bits (122), Expect = 1e-19 Identities = 202/293 (69%), Gaps = 12/293 (4%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 4886 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 4829 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA----AGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | |||||| ||||| ||| | || | ||| | || ||| | Sbjct 4828 TTAAGACCGTTGTCGTCAAC----CTGAACTCGGTTGCCCAGTCCCTCAGCCGGCCTCCT 4773 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | | || || ||||| | || ||||| || ||| | | | | | | Sbjct 4772 GCCTATCTCATCAAGTACTTCGGATTTGAGCTTGGTGCACAGGCCAACGCTAAGCCCTCT 4713 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 ||||||| | ||| | ||||| || || || | ||||||| ||||| | || ||| Sbjct 4712 GACGAGCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 4653 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || ||||||||||||||| | | ||| | ||||| |||||||| Sbjct 4652 GGCTTCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 4600 >seq3395 Length=3387 Score = 95.1 bits (104), Expect = 8e-15 Identities = 84/105 (80%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 25895 TTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTA 25949 || || || |||||||||| | ||| | ||||||||||||||||||||||| | | Sbjct 3305 TTCTACTAGGCCCGTTCCCCTAGCTATAGTTTCGCTAGATAGTAGATAGGGATAGTAGGA 3246 Query 25950 ATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGATAT 25994 |||||||||||| || || ||||| ||||||||||| |||| || Sbjct 3245 ATCTCGTTAATCTATTTATACGCGTTACTAATTAGATAACGAGAT 3201 >seq1668 Length=20715 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||||||||| || |||||| |||||| || || ||||| || || Sbjct 512 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 453 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| |||| || | || || || || || || ||||| || || || | || Sbjct 452 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 393 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| ||||| | || ||| || || ||| Sbjct 392 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 333 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||||||| || || || | || |||||||| |||||||| Sbjct 332 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||| | || || ||| |||||||||||| ||||| || | Sbjct 286 TACCACCACGTAGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCG 227 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | |||| |||| || | || || || || || || || || || || |||| || Sbjct 226 AAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGG 167 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || || ||| || || ||| ||||| | || |||||| | |||| Sbjct 166 GGATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAA 107 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGA 38307 | || | || || ||||| || |||| ||| || |||| Sbjct 106 CCTCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAACGA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334930026315017