Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3565 132 3e-26
seq1396 111 1e-19
seq3395 95.1 8e-15
seq1668 95.1 8e-15
>seq3565
Length=1458
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 708 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 767
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 768 ATCCATTCATGCGCGTCACTAATTAGATGACGA 800
>seq1396
Length=22836
Score = 111 bits (122), Expect = 1e-19
Identities = 202/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 4886 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 4829
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA----AGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | |||||| ||||| ||| | || | ||| | || ||| |
Sbjct 4828 TTAAGACCGTTGTCGTCAAC----CTGAACTCGGTTGCCCAGTCCCTCAGCCGGCCTCCT 4773
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | | || || ||||| | || ||||| || ||| | | | | | |
Sbjct 4772 GCCTATCTCATCAAGTACTTCGGATTTGAGCTTGGTGCACAGGCCAACGCTAAGCCCTCT 4713
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||||| | ||| | ||||| || || || | ||||||| ||||| | || |||
Sbjct 4712 GACGAGCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 4653
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || ||||||||||||||| | | ||| | ||||| ||||||||
Sbjct 4652 GGCTTCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 4600
>seq3395
Length=3387
Score = 95.1 bits (104), Expect = 8e-15
Identities = 84/105 (80%), Gaps = 5/105 (5%)
Strand=Plus/Minus
Query 25895 TTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTA 25949
|| || || |||||||||| | ||| | ||||||||||||||||||||||| | |
Sbjct 3305 TTCTACTAGGCCCGTTCCCCTAGCTATAGTTTCGCTAGATAGTAGATAGGGATAGTAGGA 3246
Query 25950 ATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGATAT 25994
|||||||||||| || || ||||| ||||||||||| |||| ||
Sbjct 3245 ATCTCGTTAATCTATTTATACGCGTTACTAATTAGATAACGAGAT 3201
>seq1668
Length=20715
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||||||||| || |||||| |||||| || || ||||| || ||
Sbjct 512 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 453
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| |||| || | || || || || || || ||||| || || || | ||
Sbjct 452 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 393
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| || || ||| ||||| | || ||| || || |||
Sbjct 392 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 333
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||||||||| || || || | || |||||||| ||||||||
Sbjct 332 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||| | || || ||| |||||||||||| ||||| || |
Sbjct 286 TACCACCACGTAGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCG 227
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | |||| |||| || | || || || || || || || || || || |||| ||
Sbjct 226 AAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGG 167
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||| || || ||| || || ||| ||||| | || |||||| | ||||
Sbjct 166 GGATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAA 107
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGA 38307
| || | || || ||||| || |||| ||| || ||||
Sbjct 106 CCTCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAACGA 68
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334930026315017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |