Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1668 105 6e-18
seq2589 89.7 4e-13
seq598 86.0 5e-12
seq2035 84.2 2e-11
>seq1668
Length=20715
Score = 105 bits (116), Expect = 6e-18
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
||||| || | ||||| ||||| |||||||||| || || ||| |||||| | |||
Sbjct 70 GTTAAGACCCTGACCGGAAAAACCATCACTCTTGAGGTTGAGTCCAGCGATACTATCGAC 129
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
|| | || || || || || |||||||| || || ||||| || || ||||| ||
Sbjct 130 AATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATC 189
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| || ||||| ||| | ||||| || || | || || |||||||||||||| ||
Sbjct 190 TTCGCAGGCAAGCAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAG 249
Query 22411 TCCACC 22416
||||||
Sbjct 250 TCCACC 255
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || || || | || |||||||| || | ||
Sbjct 286 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 345
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| || || || ||||||||||||||||| || || ||
Sbjct 346 GACACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 405
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || || || || ||| | ||||| || || | || || ||||||
Sbjct 406 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 465
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || ||||| | || | || |||||
Sbjct 466 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCG 500
>seq2589
Length=1087
Score = 89.7 bits (98), Expect = 4e-13
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| |||||| | ||| | ||||
Sbjct 344 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGACAACGTCAAGTCG 285
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || || |||||||| || || ||||| || || ||||| || || || |||||
Sbjct 284 AAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCAGGCAAG 225
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| || || | || || |||||||||||||| || ||||||
Sbjct 224 CAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAGTCCACC 171
>seq598
Length=6539
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 2578 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 2637
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || ||||||||||| ||||| ||||| || || |||||
Sbjct 2638 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCT 2697
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || ||||| || ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 2698 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2757
>seq2035
Length=8967
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| || || || || || || || || |||||||| ||| | ||
Sbjct 5388 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 5447
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| |||||| | || ||||||||||| || || || || |||
Sbjct 5448 GGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 5493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419706479364955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |