Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1668 105 6e-18 seq2589 89.7 4e-13 seq598 86.0 5e-12 seq2035 84.2 2e-11 >seq1668 Length=20715 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || | ||||| ||||| |||||||||| || || ||| |||||| | ||| Sbjct 70 GTTAAGACCCTGACCGGAAAAACCATCACTCTTGAGGTTGAGTCCAGCGATACTATCGAC 129 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || | || || || || || |||||||| || || ||||| || || ||||| || Sbjct 130 AATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATC 189 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || ||||| ||| | ||||| || || | || || |||||||||||||| || Sbjct 190 TTCGCAGGCAAGCAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAG 249 Query 22411 TCCACC 22416 |||||| Sbjct 250 TCCACC 255 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || |||||||| || | || Sbjct 286 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 345 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || ||||||||||||||||| || || || Sbjct 346 GACACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 405 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | ||||| || || | || || |||||| Sbjct 406 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 465 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || || ||||| | || | || ||||| Sbjct 466 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCG 500 >seq2589 Length=1087 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| | |||| Sbjct 344 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGACAACGTCAAGTCG 285 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| || || ||||| || || ||||| || || || ||||| Sbjct 284 AAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCAGGCAAG 225 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| || || | || || |||||||||||||| || |||||| Sbjct 224 CAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAGTCCACC 171 >seq598 Length=6539 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 2578 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 2637 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| ||||| || || ||||| Sbjct 2638 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCT 2697 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 2698 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2757 >seq2035 Length=8967 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || || || || || || || |||||||| ||| | || Sbjct 5388 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 5447 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| |||||| | || ||||||||||| || || || || ||| Sbjct 5448 GGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 5493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419706479364955