Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1668 131 4e-25 seq2589 123 6e-23 seq598 113 1e-19 >seq1668 Length=20715 Score = 131 bits (144), Expect = 4e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || ||||| || || ||||| | Sbjct 284 CCACCACGTAGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 225 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || ||||||||||| |||||||| || ||| Sbjct 224 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 165 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| || || || || |||| |||||| || || || Sbjct 164 ATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAACC 105 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| || || |||||||| ||||| |||| Sbjct 104 TCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAACGA 68 >seq2589 Length=1087 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| || | ||| || ||||| || || ||||| | Sbjct 142 CCACCACGGAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 201 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || ||||||||||| |||||||| || ||| Sbjct 202 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 261 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| || ||||| || |||| |||||| || || || Sbjct 262 ATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACTCGACC 321 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| || || Sbjct 322 TCAAGGGTGATGGTCTTGCCAGT 344 >seq598 Length=6539 Score = 113 bits (124), Expect = 1e-19 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 2757 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2698 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| || || ||| || || || || |||||||| || | || ||||| Sbjct 2697 AGACGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 2641 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||| || || ||||| || ||||| ||||||||| Sbjct 2640 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2581 Query 288463 AA 288464 || Sbjct 2580 AA 2579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179590814047346