Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1668 136 9e-27 seq598 113 1e-19 seq2589 109 1e-18 seq2035 93.3 1e-13 seq1762 91.5 3e-13 >seq1668 Length=20715 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||||||||| |||||||| |||| ||||||||| | | ||| Sbjct 506 CGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTA 447 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || ||||||||||| || |||||||| || ||||||||||| ||| ||| || Sbjct 446 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCC 387 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | || || || || | Sbjct 386 TCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGT 327 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || ||||| ||||| || Sbjct 326 GTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTG 289 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || ||||||||||| | ||||||||| | | ||| | ||| || Sbjct 269 AGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCC 210 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || ||||||||||||||||||||||| || Sbjct 209 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGG 169 >seq598 Length=6539 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || || | ||||| || ||||||||||||||||||| Sbjct 2759 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2700 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||||||||| || ||| || || ||||| ||||| ||| ||| | Sbjct 2699 TCAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 2640 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || ||||| | || || ||||||||||| || || || || | Sbjct 2639 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2580 Query 199620 AA 199621 || Sbjct 2579 AA 2578 >seq2589 Length=1087 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || ||||||||||| | ||||||||| | | ||| | ||| || Sbjct 157 AGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCC 216 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||||||||||||||| || || || || ||| Sbjct 217 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCC 276 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| || || | | || || || | ||||| ||| Sbjct 277 TGGATCTTCGACTTGACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 336 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 337 TTGCCAGTGA 346 >seq2035 Length=8967 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| |||||| || | | ||| | || || Sbjct 5507 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 5448 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| || ||||||||||| || Sbjct 5447 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 5407 >seq1762 Length=22727 Score = 91.5 bits (100), Expect = 3e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 || |||||||||| || ||||| ||||| ||| | || ||| | | |||| || | Sbjct 4314 GCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 4373 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || || | || || || | ||| | | | | ||||| | ||||| || | ||| Sbjct 4374 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTAG 4433 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || | ||||| || | ||||| | || | |||||||| || || || || || ||| Sbjct 4434 AGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 4493 Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007 || |||| | || | || ||| || | |||||||||||| |||| ||||| | ||| Sbjct 4494 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 4553 Query 168008 TAGAA 168012 ||||| Sbjct 4554 TAGAA 4558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178858053546869