Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq598 136 4e-27 seq1668 127 2e-24 seq2589 118 1e-21 seq2035 102 9e-17 >seq598 Length=6539 Score = 136 bits (150), Expect = 4e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 2759 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2700 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | || |||||||||| |||||| |||||| ||| | Sbjct 2699 TCAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 2641 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 2640 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2581 Query 46583 AA 46584 || Sbjct 2580 AA 2579 >seq1668 Length=20715 Score = 127 bits (140), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415 || |||| | ||| || | | |||||||||||| || | || |||||| ||||| | Sbjct 523 TAAATTACTGGCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGT 464 Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || ||||| || |||| || |||||||| || ||||| || | |||||||| Sbjct 463 TGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCT 404 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGC 46535 |||| | || | | |||||||||| |||||| |||||| | | | |||||| Sbjct 403 GGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGG 344 Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || | || || || ||||| || ||||| || || || || ||||| Sbjct 343 ATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286 Score = 122 bits (134), Expect = 1e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || ||||| || |||| || ||||||||||| ||||| Sbjct 249 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 190 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||| ||| ||||||| ||| | | Sbjct 189 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTAACATT 130 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||||| || || || || | ||||||||||| || ||||| || ||||| Sbjct 129 GTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAAC 70 >seq2589 Length=1087 Score = 118 bits (130), Expect = 1e-21 Identities = 129/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || ||||| || |||| || ||||||||||| ||||| Sbjct 177 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 236 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||| ||| ||||||| ||||| ||| Sbjct 237 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTGA-CGT 295 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 296 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 344 >seq2035 Length=8967 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| |||||||||||||||||||| Sbjct 5487 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 5428 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 5427 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 5389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565208675525640