Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq681 143 3e-28 seq1762 122 1e-21 seq2786 105 8e-17 seq4202 104 3e-16 seq2247 104 3e-16 >seq681 Length=20543 Score = 143 bits (158), Expect = 3e-28 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 373 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 432 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 433 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 492 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||| |||||| || || ||||||||| | Sbjct 493 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGC 552 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || |||| || || | || ||| ||||| | |||||| ||||||||||||| || Sbjct 553 AG-ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAAT 611 Query 868930 GAT 868932 ||| Sbjct 612 GAT 614 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| | | ||| Sbjct 1027 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 1086 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||||||||| Sbjct 1087 ACCTCGGAACTGAAACGCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCGGCGAAG 1146 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 |||||||||||||| ||| |||| ||||| |||||| | | ||| ||||| | Sbjct 1147 AAAGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 1206 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | ||| || | ||||||||| ||||||| ||||| |||||||| ||| Sbjct 1207 TGAAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 1266 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 1267 TACATTTGCCA 1277 Score = 105 bits (116), Expect = 8e-17 Identities = 140/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||||| |||||| || | ||| || ||||| ||||| ||||| Sbjct 687 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTT 746 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| ||| ||||| ||||| |||||||| ||||| || Sbjct 747 CTTGAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 806 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||| || ||| || || | | | |||||||||||| | ||||| Sbjct 807 GGCAACCAGACGCGAAGCGAAG--GTTGACTCAC-GGTCGTTGATCCACTTGAGGGCCCA 863 Query 869359 GTCGGCCTTTTT 869370 || |||||| || Sbjct 864 GTTGGCCTTCTT 875 >seq1762 Length=22727 Score = 122 bits (134), Expect = 1e-21 Identities = 291/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||| ||||| ||||||||||||| | ||| | ||||||||||||| |||||| Sbjct 4240 ACTCGACAATCTCAGTGCACAGGTTGGAGCTACGAA-TAGTACCCAGGTTCTTCTGGTTA 4298 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||||| |||||| |||| || ||||| |||| ||| Sbjct 4299 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCC 4358 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 | | ||||| |||||| || | || | || ||| ||| | ||||| | Sbjct 4359 TCAAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCTTCC 4415 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | |||||||| || ||| ||||| Sbjct 4416 TGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGG 4475 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| || || ||||| | |||||| || || | | | || ||| ||||| Sbjct 4476 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 4535 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 4536 TCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTC 4595 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || ||||| | |||| | |||||||||||||||||||||||| |||||| Sbjct 4596 TTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 4655 Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600 || || ||||||| ||| || Sbjct 4656 GCACCAGGGCGCTTGTTGCCACC 4678 >seq2786 Length=13395 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| | || ||||| | || |||||| | || || ||| Sbjct 10010 GCTGCCAACTACTTGGATATTAAGGCCCTCCTCGACGTCGGCTGCAAGACAGTCGCTAAC 10069 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || ||||||||||| |||||||| |||||| || Sbjct 10070 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 10120 >seq4202 Length=7725 Score = 104 bits (114), Expect = 3e-16 Identities = 250/370 (68%), Gaps = 19/370 (5%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | |||||||| || | || | | |||||||||||| Sbjct 6700 TGGGGGTGCGAGGCGGCGCCGATGGCGTCGACGGCGACGGTCAGGTTACCGTCGGTGCCG 6759 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| | || || | ||||||||| | ||| |||| Sbjct 6760 TTCTTGTAGCCGATGGGGAAGGACAGGCCTGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 6819 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || ||||| ||||| | |||||| | | ||||||||||| | | ||||| Sbjct 6820 GTAGTGCGAGCGCCGATCGCGCCCAGAGAGATCAGGTCTGCCAGGTACTGAGGGG----- 6874 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919 ||| || | ||| | |||| ||| | ||| | || ||| | | || ||| Sbjct 6875 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 6931 Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976 |||| ||| | ||||| ||| || | | | | | | | | |||||| |||| Sbjct 6932 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 6988 Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036 | ||| || ||| |||||||| ||||| || ||||| ||||| || | ||||| |||| Sbjct 6989 GATCGTTGATCAGTCCCTTCCAGCCGACCGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 7048 Query 1727037 TGACCACGCA 1727046 ||| |||||| Sbjct 7049 TGATCACGCA 7058 >seq2247 Length=16407 Score = 104 bits (114), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||| |||||||| || | || || |||||| Sbjct 8064 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGCAACGTACCAGTTGGACTTGGCGAG 8123 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || || ||||| |||||||||||| ||||| || ||| Sbjct 8124 CCCTGCTTCGATAAGCTTGAAGCTAAGCTCGGCCACGCCATGCTCAGTATCCCCGCGACC 8183 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||| ||||| ||| || |||| |||| Sbjct 8184 AAGGGCTTCGAGGTTGGCTCCGGTTTCGGCGGCTGCG 8220 Score = 95.1 bits (104), Expect = 1e-13 Identities = 216/320 (68%), Gaps = 10/320 (3%) Strand=Plus/Plus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||| ||| | || | |||||||| ||| ||||||| || || || | Sbjct 7376 TGGCGAGTCTCACTGT-CGCTCAGTCGGCTGTATCGTCGACGGATGTCCTCCAGGCCTAG 7434 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 | | |||||||||||||||||||||| || |||||||| || ||||| |||| | Sbjct 7435 AAATCACCGAGGCCGACATCCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCC 7494 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 || | || ||||| ||||| || || || |||||||| ||||| ||| |||| Sbjct 7495 TTACTACCCCGCGAGACGAGAAGGACCGAGTTGAGATCCAGTCAGGCACAGAGTTCGGCA 7554 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || ||| | || | | | | | || ||| |||||||| || |||| Sbjct 7555 TCACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCTAAAGACT 7614 Query 18338 ATTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATG 18390 | | ||| | ||| || || | ||||| || ||||||| ||||||| | Sbjct 7615 ACGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTT 7673 Query 18391 GCCAAGTACGGCATCAAGGC 18410 | |||||||| ||||||| Sbjct 7674 GAGAAGTACGGTGTCAAGGC 7693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106793953878619