Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1762 235 7e-57 seq681 93.3 5e-14 seq1171 89.7 6e-13 >seq1762 Length=22727 Score = 235 bits (260), Expect = 7e-57 Identities = 575/863 (67%), Gaps = 15/863 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||||| || |||| || || |||||| |||||| | ||||||| | | Sbjct 4188 GGAAGGGCGAGGGAAGCCAGGTTACAGACAGCCACCTCATCAGGGGCACTGTACTCGACA 4247 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || ||| || |||| ||||| ||||||||||||||| Sbjct 4248 ATCTCAGTGCACAGGTTGGAGCTACGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 4307 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||||||||| |||| | || ||||| ||||| | | ||||| Sbjct 4308 TTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 4367 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| || |||| || || ||| |||||| Sbjct 4368 GCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCTTCCTGCTCGTA 4423 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | |||||| || || ||||| || || | || | ||||| || |||| || Sbjct 4424 CTTCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTT 4483 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| ||||||||||| || || || | Sbjct 4484 GGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGT 4543 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | ||||| || | | ||| |||| || | ||| ||||| || | Sbjct 4544 CCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 4603 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || |||||||| | || ||| |||||||| ||||| || |||| || | | || Sbjct 4604 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGG 4663 Query 111703 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761 | | | | ||| | || | |||||||| || ||| |||||| || || ||||| | Sbjct 4664 GCGCTTGTTG-CCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGTAGCATAG 4722 Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821 ||| |||||| | || || || || || | ||| ||| | || | | | Sbjct 4723 GAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATAC 4782 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 |||| | || || ||||| ||||| ||| ||||| ||||| | | |||| Sbjct 4783 GGTGGACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAG 4842 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | |||||||| | || || | | ||| ||||||||| | | || Sbjct 4843 TATCGTAGATACCCTCAATGCTATCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCT 4902 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 112000 | || || ||| | |||||||| || || || | ||||| |||| ||| | ||| Sbjct 4903 GGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAA-GTACTTCTGG 4961 Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060 |||||| || ||||||||| | | | || || || || |||||||| |||| || Sbjct 4962 GACATCAGGTGGTATGTCTCAATGGCTCTCTCGATATCCTCGCCGTGGATTCCGACAGCA 5021 Query 112061 ACCCGCATGAACATGTACTGTGG 112083 || ||||| | || || ||| || Sbjct 5022 ACACGCATCAGCAAGTGCTGAGG 5044 >seq681 Length=20543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||||||||| || || || || || || ||||| ||||| ||||| || || Sbjct 681 GTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 740 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | |||||| || ||||||||||||||||| ||| Sbjct 741 ACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 800 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || ||||||| Sbjct 801 GGCGAAGGCAACCAGACGCGAAGCGAAGG 829 >seq1171 Length=10122 Score = 89.7 bits (98), Expect = 6e-13 Identities = 330/506 (65%), Gaps = 31/506 (6%) Strand=Plus/Minus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGT---G 11506 || || ||||| || || || | ||||| | ||||| | |||| || || || | Sbjct 1461 CGGTCGAAACGTCCGGGACGCATCAGGGCCTTGTCAAGAACATCCGGTCGGTTGGTACCG 1402 Query 11507 GCCGCAATAACCACAATGC-CAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTG 11565 ||| | |||||| ||| ||| |||| |||||||||||||| ||||| | || Sbjct 1401 GCCAGGACAACCACT-TGCTCAGAGGTATTG---AAGCCATCCATCTCAGTGAGAATCTG 1346 Query 11566 ATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTG--CGTTGCTTG 11623 || | || ||| | |||||| ||| | ||||||| | | | ||||| | Sbjct 1345 GTTGAGAGTGCTTTCACGCTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCG 1292 Query 11624 -------CCCACCGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGG 11675 || | ||||| || ||||||||||||| || || ||| || | ||| |||| Sbjct 1291 GGACTTTCCAATAGCATCGATTTCATCAATGAAGATGATGCAAGGTGTGTTCTTC-CGGG 1233 Query 11676 CGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGT 11735 | | | |||||||| || || | || ||| ||||| |||||||| || || || | Sbjct 1232 CATTGGCGAAGAGATCACGGACACGAGAGGGACCAACACCGACAAACATTTCGACGAATT 1173 Query 11736 TTGCGGCAGAG-CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGG 11794 | || | ||||| | ||| || || |||||||| || ||||| || || Sbjct 1172 CGGAACCACTGACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCTTTAGCAAGC 1114 Query 11795 AGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC- 11853 | ||||| || ||||| || || | || | ||| || ||||| ||||| ||||| Sbjct 1113 AATGTCTTACCAGTACCGGGAGGGCCTGAAAGGATGGCACCACGGGGAATCTTTGCACCC 1054 Query 11854 -ACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTT 11912 |||| | | | ||||||||||| ||| || |||| || | ||| | | Sbjct 1053 AGCTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACAAATTCCATGATCTCAACCT 996 Query 11913 TGGCCGCGTCAATCCCCTCAACATCA 11938 ||||| |||| || ||| |||| ||| Sbjct 995 TGGCCTCGTCCATACCCGCAACGTCA 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627998973367200