Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04- 07] 4,207 sequences; 31,150,696 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2879 205 3e-47 seq1668 134 4e-26 seq1494 109 2e-18 seq2589 100 9e-16 seq1728 96.9 1e-14 >seq2879 Length=7658 Score = 205 bits (226), Expect = 3e-47 Identities = 923/1453 (64%), Gaps = 21/1453 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | |||| | Sbjct 3474 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACC 3415 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | ||||| ||||| || || || |||||| | || || || || | ||| | || | Sbjct 3414 GTATCGAAATCATTGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCA 3355 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| ||||||||| | || |||||| | || || || |||| || || || | Sbjct 3354 CCGACACTGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACC 3295 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || || || ||||| || |||||| | ||||| ||| || || Sbjct 3294 ACACTGTCTTCGACGCCAAGCGTCTCATTGGTCGCCGTTTTCAGGACGCTGAAGTC---- 3239 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || | ||| | || || | || || | | | || | ||| | | || || || Sbjct 3238 CAGGCCGATATGAAGCACTGGCCATTCAA-GATCATCGAGAAGGC--TACCAAGCCCGTT 3182 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||||||| | || ||||| || || || || || || || || | ||| Sbjct 3181 ATCGAGGTTGAGTTCAAGGGTGAGGCCAAGCAGTTCACCCCTGAGGAGATCTCTGCCATG 3122 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || || ||| || | ||||| || || | |||| || || | | ||| Sbjct 3121 ATCCTCGTCAAGATGCGTGAGACCGCTGAGGCTTACCTCGGTGGCACCGTCAACAACGCT 3062 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || || || || Sbjct 3061 GTCATCACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGT 3002 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || || || | || || || || |||||||| || || ||||| Sbjct 3001 CTCATTGCCGGTCTCAACGTCCTCCGTATTATCAACGAGCCCACTGCCGCTGCCATTGCC 2942 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || ||||| || | | || || || |||| || || ||| | |||||| Sbjct 2941 TACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTTGGTGGT 2882 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 |||||||| ||||| || || || || | || ||||| || || || || || || ||| Sbjct 2881 GGTACTTTCGATGTTTCTCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACT 2822 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || | ||||| || || || || || ||||| || || || || Sbjct 2821 GCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC 2762 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | ||| | || | | || | ||||| Sbjct 2761 AACGAGTTCAAGCG-CAAGCACAAGAAGGATCTGACCACCAACGCCCGTGCTCTCCGTCG 2703 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || || || ||||| || | || || || |||| ||||| || Sbjct 2702 TCTCCGCACCGCTTGCGAGCGCGCCAAGCGCACCCTCTCTTCCGCTGCCCAGACCTCCAT 2643 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 || || || ||||| || || || |||| | || || || ||||| || || Sbjct 2642 CGAGATCGACTCTCTCTTCGAGGGTGTTGACTTCTACACCTCCATCACCCGTGCCCGTTT 2583 Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAA 350151 || || | || ||| || || | | || ||||| || || || || | Sbjct 2582 CGAGGAGCTCTGCCAGGACCTCTTCCGCGGCACCATGGAGCCCGTTGAGCGTGTCCTCCG 2523 Query 350152 AGATGCAAAAAT-GTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 || || || || | | | || | | | || | || | || ||||||||||| | Sbjct 2522 TGACGCCAAGATCGACAAGTCCTCCG-TCCACGAGATTGTCCTCGTCGGTGGTTCTACCC 2464 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270 |||| || || | || || | | || || || || || ||| || | || | Sbjct 2463 GTATCCCCAAGATCCAGAAGCTCGTTTCCGACTTCTTCAA---CAAGGACGCCAATAAGT 2407 Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTG 350330 | || || || ||||| || ||||| || ||||| ||||| ||||| |||| | || | Sbjct 2406 CCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCTGTCCAGGCCGCTATCCTGTCCG 2347 Query 350331 GAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | || ||| || | | || | | || || ||||| |||| ||||| | Sbjct 2346 GTGACCAGTCTTCCAAGTCCACCAACGAGATCCTGCTTCTCGATGTCGCTCCTCTTTCCC 2287 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 | || | || || |||||| || |||||| ||| || | || | ||| | | Sbjct 2286 TCGGTATTGAGACCGCTGGTGGTGTCATGACTCCTCTGATCAAGCGCAACACCACTATCC 2227 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || |||||| | || || || || | | || || ||||| | || || | Sbjct 2226 CCACCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTGATCC 2167 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 | || || || ||||| ||||||||||| || || || || || ||| | || | Sbjct 2166 AGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAGC 2107 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || ||||| || || | || ||||| ||| |||| ||| | |||||| ||| Sbjct 2106 TCACTGGCATTCCCCCCGCTCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTCGATGTTG 2047 Query 350628 ATTCAAATGGTAT 350640 || | || ||||| Sbjct 2046 ATGCCAACGGTAT 2034 >seq1668 Length=20715 Score = 134 bits (148), Expect = 4e-26 Identities = 176/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 140498 AATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAAT 140557 |||| |||| |||||||| | | | || || || ||||| ||||| || || || Sbjct 525 AATAAATTACTGGCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGAT 466 Query 140558 ATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTG 140617 || || || || | || || || || || || || || ||||| ||||| || || || Sbjct 465 GTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTG 406 Query 140618 CTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAAT 140676 ||| ||||||||||| || || || ||||| || || ||| || |||||||| || | | Sbjct 405 CTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTGACATTATCGATAGTGT 347 Query 140677 CAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 | |||| || ||||||||||||| ||||| || || || || || || |||||||||| Sbjct 346 CGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCA 287 Query 140737 T 140737 | Sbjct 286 T 286 Score = 120 bits (132), Expect = 9e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||||| | || || || || || || ||||| |||||||| || || || Sbjct 288 CATACCACCACGTAGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTC 229 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || || ||||| ||||| ||||| || || Sbjct 228 CGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGG 169 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 || || || || |||||||| || || | || ||||| || || | ||| | ||| | Sbjct 168 GGGGATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATC-GCTGGACT 110 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 |||| ||||| || | || |||||||| || || || || Sbjct 109 CAACCTCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAAC 70 >seq1494 Length=9732 Score = 109 bits (120), Expect = 2e-18 Identities = 102/129 (79%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| |||||| | || || ||| || || | |||||||||||||||||||| || Sbjct 3532 CGTGGAACACCAAGCGTGACGTTC---TTGGACGACACACCAGCAAAGTGGAAAGTGTTC 3476 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | |||||||||||| || || || |||| ||||||||||||||| Sbjct 3475 AGTGTCATTTGCGTTGCGGGCTCACCAATAGATTGAGCCGCAAGAACGCCAACCATTTCA 3416 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 3415 CCAGGGTTG 3407 Score = 86.0 bits (94), Expect = 2e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| ||| || || ||||||||||| | ||| |||||||| |||| Sbjct 2743 ATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 2684 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| || || || ||||| | |||| | |||| |||| | ||||| Sbjct 2683 GCGTGGAAGAAGAACTCGGTGGGAGTCAAGCCACGGAGGTATGAGTTCTCGACGAATCCA 2624 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCA 378411 | | | || || | ||| | || || | ||||| | ||||||| || || || Sbjct 2623 CGAGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGATACTTGAAGCCG 2564 Query 378412 TATGGAATTCGTTTTCCATCAACATTCTGTTGACCAA 378448 | ||||| || || || || || |||||| |||| Sbjct 2563 AACGGAATACGCTTGCCTTCCACGGACTGTTGTCCAA 2527 >seq2589 Length=1087 Score = 100 bits (110), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || || || ||||| |||||||| || | Sbjct 134 TTTGCATACCACCACGGAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGT 193 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || ||||| || || || || ||||| ||||| ||||| | Sbjct 194 AGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGT 253 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || |||||||| || || | || || || || || | ||| | || Sbjct 254 CGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATAGTATC-GCTG 312 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || ||||| || | ||||| || || Sbjct 313 GACTCGACCTCAAGGGTGATGGTCTTGCCAGT 344 >seq1728 Length=2585 Score = 96.9 bits (106), Expect = 1e-14 Identities = 220/328 (67%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 349561 TAAAATGAAGGAAATTGCTGA-AGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTA 349619 ||| |||||||| || || || ||| | || || | || || || | || ||| ||| Sbjct 1006 TAAGATGAAGGAGATCGCCGAGAGCTTCTTG-GGCAAGACTGTCACCCACGCCGTTGTTA 948 Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679 |||| || ||||| || | || ||||||||| || || || ||||| || | ||| | Sbjct 947 CTGTTCCCGCCTACTTCAGCGACGCCCAGCGTCAGGCTACCAAGGATGCCGGTACCATCG 888 Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739 | || | || || || | | | || || ||||| || || || || || || || | Sbjct 887 CCGGTCTCAACGTCCTCCGTGTTGTCAACGAGCCCACCGCCGCCGCTATCGCCTACGGTC 828 Query 349740 TTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 |||| || | ||||| || | | || ||| ||| | ||||||||||| | Sbjct 827 TTGACAAGACCGGTGAC---GAGCGCCAGGTCATTGTTTACGATCTTGGTGGTGGTACCT 771 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 | ||||| || || || | |||| | || |||| || ||| || || ||||||| Sbjct 770 TCGATGTGTCTCTTCTGTCTATTGACAACGGTGTTTTCGAGGTTCTGGCTACCGCTGGTG 711 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGA 349887 | || || |||||||| || ||||| || Sbjct 710 ACACCCACCTTGGTGGTGAGGATTTCGA 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515172724473221