Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1668 114 8e-21
seq2589 84.2 1e-11
>seq1668
Length=20715
Score = 114 bits (126), Expect = 8e-21
Identities = 166/233 (71%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||||||||||| ||||||||| |||||| || ||||| || || ||
Sbjct 513 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 454
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || || || ||||| || || || | ||||| ||||| || ||
Sbjct 453 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 394
Query 34599 CACTCCCTCCTTGTCTGTGATCTT----TTG-TTTTAACGATAAAATTGTGTCTTCGCTC 34653
| ||||||||||| |||||| ||| ||| ||||| ||||| |
Sbjct 393 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA-----GTGTCGGATGAC 339
Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| | || || || || || || | ||| ||||| |||||||||||
Sbjct 338 TCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | ||||| ||| ||||||||||||||| || || ||||| || ||
Sbjct 275 AGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGT 216
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || || || || || || | |||||| ||||| || || | ||||||
Sbjct 215 CCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCC 156
Query 34609 TTGTCTGTGATCTT 34622
|| || ||||||
Sbjct 155 TTATCCTGGATCTT 142
>seq2589
Length=1087
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| ||||||||||||||| || || ||||| || || |||| ||||| ||
Sbjct 166 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGC 225
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| || || || || | |||||| ||||| || || | |||||||| || ||||||
Sbjct 226 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT 284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314713462928231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |