Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1668 140 8e-28
seq3047 98.7 2e-15
seq598 98.7 2e-15
>seq1668
Length=20715
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || |||||||||||||| || || |||| ||||| || | | |||
Sbjct 507 ACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 448
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 447 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACC 388
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| || | || || || |
Sbjct 387 CTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAG 328
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | || || | ||| | |||||
Sbjct 327 TGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286
>seq3047
Length=1814
Score = 98.7 bits (108), Expect = 2e-15
Identities = 200/293 (68%), Gaps = 7/293 (2%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||| ||||| |||| ||||||||| | | || || ||||| | |
Sbjct 261 ACTTTATACTTAATGTTTGCATTATTTTCTGGTTTAGTTGGAACAGCGTTTTCAGTTTTA 320
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558
|| || ||||| ||| ||| ||| ||| ||| |||| | || ||| ||| | |
Sbjct 321 ATCAGATTAGAGTTATCTGGTCCAGGTGTACAATATATATCAGAC--AAT---CAATTAT 375
Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618
| || ||| || || |||||||| | | ||||||||||| | |||||||| |
Sbjct 376 ATAATAGTATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCAT 435
Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678
| || || ||||| || |||| || | || ||| | |||| | ||| |||||||| |
Sbjct 436 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCAT 495
Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731
|||| || | || |||||||||||||||||| || ||| |||||| ||
Sbjct 496 TTCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 548
Score = 91.5 bits (100), Expect = 4e-13
Identities = 82/101 (81%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729
||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct 941 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 884
Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
| | ||||||||| ||||| || ||||||||||||||
Sbjct 883 GCTACTTCAAAAAAGGATGTATTGAAGTTTCTATCAGTTAA 843
>seq598
Length=6539
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| || ||||||||
Sbjct 2757 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 2698
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || |||||||| ||||| || |||||||| |||||||| ||| || |||
Sbjct 2697 AGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 2638
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | || || ||||| ||||||| || || | |||
Sbjct 2637 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192466919959658
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |