Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20verrucosum_20[genbank_20GCA_5F000970515.1_202015-04-
07] 4,207 sequences; 31,150,696 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1668 140 3e-28
seq598 138 1e-27
seq2035 109 5e-19
seq2589 104 2e-17
>seq1668
Length=20715
Score = 140 bits (154), Expect = 3e-28
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| |||||||| || || ||| ||||||||| ||||| ||||| ||
Sbjct 513 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 454
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || |||||||| || ||||| || |||||||| ||||| | ||
Sbjct 453 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 394
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812
|| | |||||||||| ||| || ||| | | | ||| | |||||| |||||
Sbjct 393 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA--GTGTCGGATGACTCG 336
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || || || || || |||||||| ||||||||||||||
Sbjct 335 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 286
Score = 134 bits (148), Expect = 1e-26
Identities = 162/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | ||| || || || ||| |||||| |||||||| ||||| ||
Sbjct 284 CCACCACGTAGACGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 225
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 224 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 165
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || ||| ||| | | | ||| ||||| ||||| ||
Sbjct 164 ATGCCCTCCTTATCCTGGATCTTCGACTT-AACATTGTCGATAGTATCGCTGGACTCAAC 106
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || ||||| || ||||| ||||| ||||
Sbjct 105 CTCAAGAGTGATGGTTTTTCCGGTCAGGGTCTTAACGA 68
>seq598
Length=6539
Score = 138 bits (152), Expect = 1e-27
Identities = 142/183 (78%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| |
Sbjct 2759 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 2700
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||| | ||||| || |||||||||| ||| || ||| ||| |
Sbjct 2699 TCAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 2641
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 2640 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2581
Query 41852 AAA 41854
|||
Sbjct 2580 AAA 2578
>seq2035
Length=8967
Score = 109 bits (120), Expect = 5e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || || ||||||||| ||||| || ||
Sbjct 5526 ACCACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 5467
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| |
Sbjct 5466 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 5407
Query 41752 GGGAACGCTCTCCTTGTC 41769
||||| | |||||||||
Sbjct 5406 GGGAATACCCTCCTTGTC 5389
>seq2589
Length=1087
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| || || || ||| |||||| |||||||| ||||| ||
Sbjct 142 CCACCACGGAGGCGAAGCACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 201
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 202 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 261
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || ||| ||| | | | ||| ||||| ||||| ||
Sbjct 262 ATGCCCTCCTTATCCTGGATCTTCGACTT-GACGTTGTCGATAGTATCGCTGGACTCGAC 320
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || || || || ||
Sbjct 321 CTCAAGGGTGATGGTCTTGCCAGT 344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462279688588400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |