Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq9 116 4e-21 seq4 116 4e-21 >seq9 Length=742928 Score = 116 bits (128), Expect = 4e-21 Identities = 661/1049 (63%), Gaps = 16/1049 (2%) Strand=Plus/Plus Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 734492 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 734551 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA-----GATTTGTATC 53918 |||| || | ||| || | ||||| ||||||| || | | || | Sbjct 734552 TGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGTCCC 734611 Query 53919 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 || | ||| | | | | || | | |||| ||||| || || | |||| ||| Sbjct 734612 TCCTG-CTCGTACTTCTCGTAGAGAGCATCG----AACTCCTCACCGTAGACATCAGCCA 734666 Query 53979 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 54038 || || || | || || | | | ||| || |||| ||| || || |||| Sbjct 734667 GGCCGGGGGCCTCGTTGGGGCAGAAGAGTGTCCAATCGCCGTTGGCCTCAACACGCTTCA 734726 Query 54039 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 | |||||||| || |||| | || || ||| || || | | | | ||||| || Sbjct 734727 TGAAGAGATCGGGGGTCCACAAGGCGTAGAAA-AGGTCACGAGCACGAACCTCCTCCTTA 734785 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 734786 CCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 734845 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 || | | | ||||| || ||||| || ||||| || | || | ||||||||||| Sbjct 734846 ATAGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTATTG 734905 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 734906 AACACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 734965 Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337 || | |||||||| || ||||| || || || || | |||||||| | Sbjct 734966 CCGGTAGCACGAATGCGGTGAACATTCAGACCAATACCACCAGCGGTCTTAGAGATCATG 735025 Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 54397 || || || | ||||| ||||| ||||| || || ||| | |||| | || || Sbjct 735026 GCACAGGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCATATCAACCAGG 735085 Query 54398 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 54457 || || | | ||| | || ||| | ||||| || | || || || ||||| Sbjct 735086 AAGCAAGATGCAAGCTGGGGCTGAGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 735145 Query 54458 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTG 54516 || || | || | || | || | ||| ||||| || || || || ||| || | Sbjct 735146 GTGAAGAACTTCTGGGACATCAGGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCACCG 735205 Query 54517 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 54576 || ||||| || || |||||||| | || |||||| || | ||| | | ||| ||| Sbjct 735206 -TGGATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTT 735264 Query 54577 TATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 54636 || || | ||| || || | || || || || || ||||||| ||||| Sbjct 735265 AATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTC 735324 Query 54637 TCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 54696 || || || | ||| | ||||| || | || || || |||| | | | | || Sbjct 735325 ACGGTCATACACAATGGCCGAGTTAAGCTCCTCAGCATGCTTCATAACGATCT-CGTAGT 735383 Query 54697 AATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 | || ||| || || |||| | | || || || || || ||||| | | | || Sbjct 735384 GTTTCTGTGAGATCATAGGAGCAGGCTTGTTGTTCTTGGGGTTCACATAATGGTAGAGAT 735443 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 | || || | || | |||||||||| ||||| || ||||| ||||| || | Sbjct 735444 CGGAGATGACCATAGAGAACTGCTTTTTTGTTTGCTTGTGGAGGTTTGAAACGGCGATAC 735503 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGT 54844 || || |||||||| || || || ||| Sbjct 735504 GTGCAGCGAGAATGGCGTAGTCGGGGTGT 735532 >seq4 Length=1200879 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| | ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 492758 AACAGGAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 492817 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| |||||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 492818 AAAGTGAGACCGGGCATCAGGCCACGCTTCTTTAGCCAGAAGATAGAGGCGAATGAGCCA 492877 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || |||||||| || || || || || ||||||| Sbjct 492878 GAGAAGAAAATACCCTCAACAGCGGCGAAGGCAA 492911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716701796800