Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq48 123 3e-23 seq2 96.9 4e-15 >seq48 Length=185535 Score = 123 bits (136), Expect = 3e-23 Identities = 164/221 (74%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | |||| || |||||||| || |||||||| || | ||||| || | Sbjct 97131 ACGCAACACTAGGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCCGAGAGAGTACGTCC 97190 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||||||||| | || | | |||||| Sbjct 97191 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTT 97250 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACC 43142 ||| ||| | || | |||| ||| | | | ||||| |||| || || || | | Sbjct 97251 ATCC-TGAATCTTGCTCTTGA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCTAGC 97305 Query 43143 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || | ||||| |||||||||||||| Sbjct 97306 GTGATAGTCTTGCCGGTCAAAGTCTTGACAAAGATTTGCAT 97346 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||| || | ||| |||||||| || || ||||| | | Sbjct 97576 CCACCACGTAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTATAATCGGAC 97635 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || |||||||| || ||||| || || ||||||||||||| || Sbjct 97636 AGAGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGA 97695 Query 43077 ACGCTCTCCTTGTCCATGATTTT 43099 | || |||||||||| ||| || Sbjct 97696 ATGCCCTCCTTGTCCTGGATCTT 97718 >seq2 Length=1449485 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 515153 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 515094 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||| ||| ||| || |||| ||| | Sbjct 515093 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 515035 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 515034 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 514975 Query 43173 AA 43174 || Sbjct 514974 AA 514973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571812882504800