Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9 134 2e-26 seq4 111 2e-19 >seq9 Length=742928 Score = 134 bits (148), Expect = 2e-26 Identities = 669/1049 (64%), Gaps = 16/1049 (2%) Strand=Plus/Plus Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856 || |||||||| ||||| || |||||||| || || || || || ||||||| ||| || Sbjct 734492 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 734551 Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT 71915 || | || | ||| || | ||||| | || ||||||| || | || | | | | Sbjct 734552 TGGGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGC--CACGT 734608 Query 71916 TTCTCTT--TCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 ||| | ||||| || | ||| | | |||||||| || || | ||| | | Sbjct 734609 CCCTCCTGCTCGTACTTCTCGTAGAGAGCA--TCGAACTCCTCACCGTAGACATCAGCCA 734666 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 || || || || || || | | || ||| || || | | | || || |||| Sbjct 734667 GGCCGGGGGCCTCGTTGGGGCAGAAGAGTGTCCAATCGCCGTTGGCCTCAACACGCTTCA 734726 Query 72032 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090 | |||||||| || |||| | || || ||| || || | | | | |||||| || Sbjct 734727 TGAAGAGATCGGGGGTCCACAAGGCGTAGAAA-AGGTCACGAGCACGAACCTCCTCCTTA 734785 Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 734786 CCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 734845 Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210 || || | | || || || ||||| || ||||| || | || | ||||||||||| Sbjct 734846 ATAGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTATTG 734905 Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 734906 AACACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 734965 Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 || | |||||||| | || ||||| || || || || | |||||||| | Sbjct 734966 CCGGTAGCACGAATGCGGTGAACATTCAGACCAATACCACCAGCGGTCTTAGAGATCATG 735025 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || || || | ||||| ||||| ||||| || || ||| | |||| | || || Sbjct 735026 GCACAGGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCATATCAACCAGG 735085 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 || || | | ||| | || ||| | ||||| || | || || || ||||| Sbjct 735086 AAGCAAGATGCAAGCTGGGGCTGAGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 735145 Query 72451 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC-CATTG 72509 || || | || | |||| || | ||| |||||||| || || || ||| || | Sbjct 735146 GTGAAGAACTTCTGGGACATCAGGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCACCG 735205 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 || ||||| || || |||||||| | || ||||| || | ||| | | ||| || Sbjct 735206 -TGGATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTT 735264 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 || | | ||| || || | || || || || || ||||||| ||||| Sbjct 735265 AATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTC 735324 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689 || || || | ||| |||| || || | || || || |||| || | | | || Sbjct 735325 ACGGTCATACACAATGGCCGAGTTAAGCTCCTCAGCATGCTTCATAACGATCT-CGTAGT 735383 Query 72690 GATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAAT 72748 | | || ||| || || |||| | | || || || || || ||||| | | | | || Sbjct 735384 GTTTCTGTGAGATCATAGGAGCAGGCTTGTTGTTCTTGGGGTTCACATAATGGTAGAGAT 735443 Query 72749 CCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTC 72808 | || || | || | |||||||||| |||||| || ||||| ||||| || | Sbjct 735444 CGGAGATGACCATAGAGAACTGCTTTTTTGTTTGCTTGTGGAGGTTTGAAACGGCGATAC 735503 Query 72809 TGGCGGCTAGAATGGCATAATCTGGATGT 72837 || || |||||||| || || || ||| Sbjct 735504 GTGCAGCGAGAATGGCGTAGTCGGGGTGT 735532 >seq4 Length=1200879 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| | ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 492758 AACAGGAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 492817 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 492818 AAAGTGAGACCGGGCATCAGGCCACGCTTCTTTAGCCAGAAGATAGAGGCGAATGAGCCA 492877 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || ||||| || || || || || || ||||||| Sbjct 492878 GAGAAGAAAATACCCTCAACAGCGGCGAAGGCAA 492911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671133663101600