Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9 140 4e-28 seq4 116 5e-21 >seq9 Length=742928 Score = 140 bits (154), Expect = 4e-28 Identities = 669/1049 (64%), Gaps = 16/1049 (2%) Strand=Plus/Plus Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 734492 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 734551 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT 62964 || | || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 734552 TGGGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGT 734608 Query 62965 TTCTCTT--TCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63020 ||| | ||||| | ||| | | |||||||| || || | |||| ||| Sbjct 734609 CCCTCCTGCTCGTACTTCTCGTAGAGAGCA--TCGAACTCCTCACCGTAGACATCAGCCA 734666 Query 63021 GTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63080 | || || || | || || | | | ||| || |||| ||| || || |||| Sbjct 734667 GGCCGGGGGCCTCGTTGGGGCAGAAGAGTGTCCAATCGCCGTTGGCCTCAACACGCTTCA 734726 Query 63081 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 | |||||||| || |||| | || || ||| || || | | | | ||||| || Sbjct 734727 TGAAGAGATCGGGGGTCCACAAGGCGTAGAAA-AGGTCACGAGCACGAACCTCCTCCTTA 734785 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 734786 CCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 734845 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 || || | | ||||| || ||||| || ||||| || | || | ||||||||||| Sbjct 734846 ATAGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTATTG 734905 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 734906 AACACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 734965 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || | |||||||| || ||||| || || || || | |||||||| | Sbjct 734966 CCGGTAGCACGAATGCGGTGAACATTCAGACCAATACCACCAGCGGTCTTAGAGATCATG 735025 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 || || || | ||||| ||||| ||||| || || ||| | |||| | || || Sbjct 735026 GCACAGGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCATATCAACCAGG 735085 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 || || | | ||| | || ||| | ||||| || | || || || |||||| Sbjct 735086 AAGCAAGATGCAAGCTGGGGCTGAGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 735145 Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTG 63558 || || | || | || | || | ||| |||||||| || || || ||| || | Sbjct 735146 GTGAAGAACTTCTGGGACATCAGGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCACCG 735205 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 || ||||| || || |||||||| | || |||||| || | ||| | | ||| ||| Sbjct 735206 -TGGATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTT 735264 Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 || | | ||| || || | || || || || || ||||||| ||||| Sbjct 735265 AATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTC 735324 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738 || || || | ||| ||||||| || | || || || |||| | | | | || Sbjct 735325 ACGGTCATACACAATGGCCGAGTTAAGCTCCTCAGCATGCTTCATAACGATCT-CGTAGT 735383 Query 63739 AATACT-TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 63797 | || ||| || |||||| | | || || || || || ||||| | | | | || Sbjct 735384 GTTTCTGTGAGATCATAGGAGCAGGCTTGTTGTTCTTGGGGTTCACATAATGGTAGAGAT 735443 Query 63798 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 63857 | || || | || | |||||||||| ||||| || ||||| ||||| || | Sbjct 735444 CGGAGATGACCATAGAGAACTGCTTTTTTGTTTGCTTGTGGAGGTTTGAAACGGCGATAC 735503 Query 63858 TAGCGGCTAGAATGGCATAATCCGGATGT 63886 || || |||||||| || || || ||| Sbjct 735504 GTGCAGCGAGAATGGCGTAGTCGGGGTGT 735532 >seq4 Length=1200879 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| | ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 492758 AACAGGAGACAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 492817 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| |||||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 492818 AAAGTGAGACCGGGCATCAGGCCACGCTTCTTTAGCCAGAAGATAGAGGCGAATGAGCCA 492877 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || |||||||| || || || || || ||||||| Sbjct 492878 GAGAAGAAAATACCCTCAACAGCGGCGAAGGCAA 492911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633626772536000