Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq48 122 7e-23 seq21 84.2 2e-11 >seq48 Length=185535 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || || || || | || |||||||| || | || Sbjct 97574 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 97515 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || || |||||||| |||||||| ||||| ||||| || Sbjct 97514 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 97455 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || ||||| || | || ||| |||||| |||||||||||||| Sbjct 97454 CAGCGTTTGATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACACTCTCCGATTACAAC 97395 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || |||||||| Sbjct 97394 ATTCAGAAGGAATCCAC 97378 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| ||||| || || |||| || || || || | | | Sbjct 97346 ATGCAAATCTTTGTCAAGACTTTGACCGGCAAGACTATCACGCTAGAGGTTGAGAGCTCA 97287 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| || |||||||||||||| || || || Sbjct 97286 GACACCATCGACAACGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAG 97227 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || |||| || ||||| Sbjct 97226 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTCTCGGACTACAAT 97167 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||| | || |||| ||||| |||| || || Sbjct 97166 ATCCAGAAGGAGAGTACCCTGCACCTAGTGTTGCGTCTGCGTGGCGG 97120 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | | || ||| | ||| || | || Sbjct 97778 ACCGGAAAGACTATCACCCTCGAGGTCGAGTCATCTGACACCATCGACAATGTTAAGTCC 97719 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || || || || || |||||||| Sbjct 97718 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 97659 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| |||||| | |||||||| ||||| ||||| |||||||| | || Sbjct 97658 CAGCTGGAGGACGGCCGCACTCTGTCCGATTATAACATCCAAAAGGAATCCACTCTCCAC 97599 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | || || ||| Sbjct 97598 TTGGTTCTCCGTCTACGTGGTGGT 97575 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| || |||| Sbjct 98063 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTCAAGTCG 98004 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || |||||| | || ||||||||||| Sbjct 98003 AAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAACGTTTGATCTTTGCCGGCAAG 97944 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| |||||| | ||||| || || || || || || ||||| Sbjct 97943 CAGCTGGAGGACGGTCGCACCCTTTCCGACTATAATATCCAGAAGGAGTCCAC 97891 >seq21 Length=423308 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || || || || || || || || || || ||| | || Sbjct 126278 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCTGGTAAGCAGCTCGA 126337 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| |||| ||||||||||| || || || || ||| Sbjct 126338 GGATGGCCGCACTCTCTCGGATTACAACATCCAGAAGGAGTCGACC 126383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419724623812900