Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 125 1e-23 seq1 122 2e-22 >seq4 Length=1200879 Score = 125 bits (138), Expect = 1e-23 Identities = 279/409 (68%), Gaps = 20/409 (5%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||| ||||||||||| ||| Sbjct 492500 TCGAAGAAGTTGGTCTTTCCGGCCAGGGAGATGGACTCCATGAAATCGAAGGGGTTGGTG 492559 Query 251623 GC---ATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 || || ||||| |||| | ||| || || | | | ||| || || || ||||| Sbjct 492560 GCGTTATAGTACTTCTTG---TTGCCGAGGGCCAACAGCAGGCGATCAGCGACGAACTCA 492616 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | || | | |||||| | |||||||| |||| || || ||| |||| || ||| Sbjct 492617 ATGTATTCGCACATCAGCTTGGAGTTCATTCCAAGCAGACCACAGGGAAGAGCGTCAGTC 492676 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCA-- 251794 | ||| |||| ||| || | || ||||| | | || ||| ||||| || | Sbjct 492677 AGGAACTCCTGCTCGATGCCGACAGCCTCGACAATGATGTCCTCAACCACCT-TGGAATC 492735 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACC 251852 | | | | | ||| || | ||| ||||||| | || || | || ||| ||||| Sbjct 492736 GGGGC-GGTGGTT---CATGTGGGAGAACAGGAGACAAGCGAAGTCAGT--GTGGAGACC 492789 Query 251853 CTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCT 251912 |||||| ||| ||| | ||||||||| | | || || ||||||| ||||| ||| | Sbjct 492790 CTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCGGGCATCAGGCCACGCTTCTT 492849 Query 251913 GAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 ||||||||||| | | || || |||||||| | | |||||| ||| Sbjct 492850 TAGCCAGAAGATAGAGGCGAATGAGCCAGAGAAGAAAATACCCTCAACA 492898 >seq1 Length=2036226 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 |||||| ||||| || ||||| ||||| ||||| || |||| ||||||||||| || Sbjct 359737 AGGTGAAGATCTTTGCAACTGTACCTTCTCCCTCGCCTACGGTGCCAAGATTCTGCTGAA 359678 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | | | | ||||||||||| | || || |||||| |||| ||||| || | Sbjct 359677 CCAGACTCACTTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 359618 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| |||||| ||||| ||||| |||| ||||| || || || || || Sbjct 359617 CGGAAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAA 359558 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 359557 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 359516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027828108355060