Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24]
660 sequences; 31,061,096 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 1e-23
seq1 122 2e-22
>seq4
Length=1200879
Score = 125 bits (138), Expect = 1e-23
Identities = 279/409 (68%), Gaps = 20/409 (5%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| || |||| ||||| ||||||||| ||||||||||| |||
Sbjct 492500 TCGAAGAAGTTGGTCTTTCCGGCCAGGGAGATGGACTCCATGAAATCGAAGGGGTTGGTG 492559
Query 251623 GC---ATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
|| || ||||| |||| | ||| || || | | | ||| || || || |||||
Sbjct 492560 GCGTTATAGTACTTCTTG---TTGCCGAGGGCCAACAGCAGGCGATCAGCGACGAACTCA 492616
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739
| || | | |||||| | |||||||| |||| || || ||| |||| || |||
Sbjct 492617 ATGTATTCGCACATCAGCTTGGAGTTCATTCCAAGCAGACCACAGGGAAGAGCGTCAGTC 492676
Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGCCA-- 251794
| ||| |||| ||| || | || ||||| | | || ||| ||||| || |
Sbjct 492677 AGGAACTCCTGCTCGATGCCGACAGCCTCGACAATGATGTCCTCAACCACCT-TGGAATC 492735
Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACC 251852
| | | | | ||| || | ||| ||||||| | || || | || ||| |||||
Sbjct 492736 GGGGC-GGTGGTT---CATGTGGGAGAACAGGAGACAAGCGAAGTCAGT--GTGGAGACC 492789
Query 251853 CTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCT 251912
|||||| ||| ||| | ||||||||| | | || || ||||||| ||||| ||| |
Sbjct 492790 CTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCGGGCATCAGGCCACGCTTCTT 492849
Query 251913 GAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
||||||||||| | | || || |||||||| | | |||||| |||
Sbjct 492850 TAGCCAGAAGATAGAGGCGAATGAGCCAGAGAAGAAAATACCCTCAACA 492898
>seq1
Length=2036226
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
|||||| ||||| || ||||| ||||| ||||| || |||| ||||||||||| ||
Sbjct 359737 AGGTGAAGATCTTTGCAACTGTACCTTCTCCCTCGCCTACGGTGCCAAGATTCTGCTGAA 359678
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | | | | ||||||||||| | || || |||||| |||| ||||| || |
Sbjct 359677 CCAGACTCACTTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 359618
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| |||| |||||| ||||| ||||| |||| ||||| || || || || ||
Sbjct 359617 CGGAAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAA 359558
Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || |||||||| |||||||
Sbjct 359557 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 359516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027828108355060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |