Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq2 87.8 2e-12 >seq4 Length=1200879 Score = 118 bits (130), Expect = 1e-21 Identities = 295/446 (66%), Gaps = 23/446 (5%) Strand=Plus/Minus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| || ||||| | || || || ||| || ||| | ||||| | Sbjct 492914 TGGTTGCCTTCGCCGCTGTTGAGGGTATTTTCTTCTCTGGCTCATTCGCCTCTATCTTCT 492855 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| | |||||||| || || ||| ||||||| |||| || || | Sbjct 492854 GGCTAAAGAAGCGTGGCCTGATGCCCGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 492795 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCTC------TACTACAAGACGCGCGTGACCG 52575 |||| || || ||||| ||||| || || ||| | | ||| || | | ||| Sbjct 492794 ACGAGGGTCTCCACACTGACTTCGCTTGTCTCCTGTTCTCCCACATGAACCACCGCCCCG 492735 Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 | || ||| | ||||| || ||| ||||| || | ||||| Sbjct 492734 ATTCCAAGGTGGTTGAGGACATCAT--------TGTC----GAGGCTGTCGGCATCGAGC 492687 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| | || | ||| || || | ||||| || |||||| | || |||| Sbjct 492686 AGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTGGAATGAACTCCAAGCTGATGT 492627 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 |||| ||||| ||||| || || ||||| ||| || || ||||| || | | |||||| Sbjct 492626 GCGAATACATTGAGTTCGTCGCTGATCGCCTGCTGTTGGCCCTCGG-CAACAAGAAGTAC 492568 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||||| ||| || || || || ||| | ||| || || | || ||||||||| Sbjct 492567 TATAACGCCACCAACCCCTTCGATTTCATGGAGTCCATCTCCCTGGCCGGAAAGACCAAC 492508 Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||| || || Sbjct 492507 TTCTTCGAGAAGCGTGTCGGTGACTA 492482 >seq2 Length=1449485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 515153 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 515094 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || || || || | || || || | ||| Sbjct 515093 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATC-CTGGATCTTGGTCTTGACGTTG 515035 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 515034 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 514976 Query 138603 AAAA 138606 ||| Sbjct 514975 GAAA 514972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258305835200