Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20vulpinum_20[genbank_20GCA_5F002072255.1_202017-03-24] 660 sequences; 31,061,096 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 3e-14 seq48 93.3 3e-13 >seq89 Length=51256 Score = 96.9 bits (106), Expect = 3e-14 Identities = 348/541 (64%), Gaps = 4/541 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | |||||||| || ||||| ||||| | | ||| ||||| Sbjct 49891 GGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGCGATGACCGCATTGAA 49832 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || || ||||| || || |||||| | || || || || | || |||||| || || Sbjct 49831 ATCATCGCCAACGACCAGGGTAACCGCACCACCCCCTCGTTCGTCGGTTTCACCGACACC 49772 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | |||||||| || || |||||| | | || || ||| ||| | Sbjct 49771 GAGCGTCTCATCGGTGATGCCGCCAAGAATCAAGTCGCCATGAACCCCCACAACACTGTC 49712 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||| || ||| | ||||| | |||| | || | || ||||| |||||| Sbjct 49711 TTTGATGCCAAGCGTCTCATTGGTCGTCGTTTCCAGGACGCTGAAGTCCAGGCCGATATG 49652 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGA-AGCTACTCA 550296 ||||| ||||||||| | || ||| | || || || || || | | | | Sbjct 49651 AAGCACTGGCCTTTCAAGATCGTTGAGAAGGCTACCAAGCCCGTCATCGAGATCGAGT-- 49594 Query 550297 TGAAGGAT-CTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAA 550355 | |||| | | || || || | || || | || || | ||| | | | || | Sbjct 49593 TCAAGGGTGAGGCCAAGCAGTTCACCCCTGAGGAGATCTCCGCCATGATCCTCGTCAAGA 49534 Query 550356 TGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTAC 550415 || | || ||| |||| | ||| || | | || || || ||||| | Sbjct 49533 TGCGTGAGACCGCCGAGGCTTACCTCGGTGGTACTGTCAACAACGCTGTTATCACTGTTC 49474 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 | || || || || || || || ||||| ||||| || ||||| || | ||||| || | Sbjct 49473 CTGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGATGCCGGTCTCATTGCCGGTC 49414 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | || ||||| ||||| ||||| || || ||||| ||||| |||| || || ||||| | Sbjct 49413 TCAACGTTCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCTTGACA 49354 Query 550536 A 550536 | Sbjct 49353 A 49353 >seq48 Length=185535 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||| || || || ||| || ||| |||||||| | || || | Sbjct 97357 AGACGAAGGACAAGGTGGAGTGTGGATTCCTTCTGAATGTTGTAATCGGAGAGTGTGCGG 97416 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||||||||| || || || || || | | ||||| || || ||||| || || Sbjct 97417 CCATCTTCAAGTTGCTTGCCTGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCCTCC 97476 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 ||||||||||| || || || || || ||||| | ||| | | ||| || || Sbjct 97477 TTATCTTGAATCTTGGACTTCACATTATCGATAGTATC-GGATGACTCGACTTCAAGTGT 97535 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || ||| || ||||| ||||| || |||||||| |||||| Sbjct 97536 AATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATA 97575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029261096223400