Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 141 2e-28 >seq1 Length=8787864 Score = 141 bits (156), Expect = 2e-28 Identities = 287/417 (69%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 230229 TTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 230288 |||| | ||||||| ||| || ||| ||| |||||||||| || | || || Sbjct 4218684 TTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAA 4218743 Query 230289 CGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTAT-GTATTCA 230346 |||| ||||| ||| |||||||||||||| || | | |||| | |||| | || || Sbjct 4218744 CGAGCTCATCTCTCGTGACGAGGGTCTCCA-CACCGACTTCG-CTTGCTTGTTGTTCTCT 4218801 Query 230347 AAGCTCCAGAACAAGCTACCATTC---GAGACGGTCAAACAAATCATTACAGAAGCAGTT 230403 | ||| ||||| | || | |||| ||| | | |||||| || || || Sbjct 4218802 CACCTC---AACAACCGCCCCAGCAAGGAGATTGTCCAGAAGATCATTGTCGACGCTGTC 4218858 Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGC 230462 || | ||| |||||||| | || ||| | || || ||| || | ||||||||| | Sbjct 4218859 GAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTG-CGCTCTGCTCGGCATGAACTC 4218917 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | || ||| |||||||| || ||||| |||||||| | | || || || || | Sbjct 4218918 CAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAA 4218977 Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 |||||| || ||| ||| | |||||||| | || |||||| ||| || || || Sbjct 4218978 CGAGAAGGTCTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGG 4219037 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 ||||||||||||||||| ||||| ||| ||||||| || | | | ||||| ||||| Sbjct 4219038 CAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCAAAAGGCCGGTGTCATGAA 4219094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823823806190