Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 2e-28
>seq1
Length=8787864
Score = 141 bits (156), Expect = 2e-28
Identities = 287/417 (69%), Gaps = 12/417 (3%)
Strand=Plus/Plus
Query 230229 TTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 230288
|||| | ||||||| ||| || ||| ||| |||||||||| || | || ||
Sbjct 4218684 TTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAA 4218743
Query 230289 CGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTAT-GTATTCA 230346
|||| ||||| ||| |||||||||||||| || | | |||| | |||| | || ||
Sbjct 4218744 CGAGCTCATCTCTCGTGACGAGGGTCTCCA-CACCGACTTCG-CTTGCTTGTTGTTCTCT 4218801
Query 230347 AAGCTCCAGAACAAGCTACCATTC---GAGACGGTCAAACAAATCATTACAGAAGCAGTT 230403
| ||| ||||| | || | |||| ||| | | |||||| || || ||
Sbjct 4218802 CACCTC---AACAACCGCCCCAGCAAGGAGATTGTCCAGAAGATCATTGTCGACGCTGTC 4218858
Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGC 230462
|| | ||| |||||||| | || ||| | || || ||| || | ||||||||| |
Sbjct 4218859 GAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTG-CGCTCTGCTCGGCATGAACTC 4218917
Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522
| || ||| |||||||| || ||||| |||||||| | | || || || || |
Sbjct 4218918 CAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAA 4218977
Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582
|||||| || ||| ||| | |||||||| | || |||||| ||| || || ||
Sbjct 4218978 CGAGAAGGTCTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGG 4219037
Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
||||||||||||||||| ||||| ||| ||||||| || | | | ||||| |||||
Sbjct 4219038 CAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCAAAAGGCCGGTGTCATGAA 4219094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823823806190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |