Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 4e-14
>seq1
Length=8787864
Score = 93.3 bits (102), Expect = 4e-14
Identities = 181/265 (68%), Gaps = 3/265 (1%)
Strand=Plus/Minus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || || ||||||||||| ||||| | ||
Sbjct 4218433 TCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGTGCCTCGGGGATC 4218374
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || || || || || ||||||||||||| ||||| |||||| || ||
Sbjct 4218373 TGGACCTCGCCGCTGAAACGCTCAACCAGGTTCTCATTGACGATGCCGTCAGAGGCGGCG 4218314
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC--AGATG-TAAGAATATGCCAA 16678
|| || |||| ||||| ||||| |||| ||||| | || | | | |||
Sbjct 4218313 AAGAAGGCCAGGATGTGGGAGATGAAGTATTGCTCGTCTTCGTTGATCTTGTTGTTCCAG 4218254
Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738
|| | | ||| ||||| | ||| | || || | ||||| ||| |||| |||||
Sbjct 4218253 TCGTGGAGATCCTTGGACAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTGAGCCTTC 4218194
Query 16739 TTATACATTTTCCAAATATCATTGT 16763
|| ||||||| ||| || | || ||
Sbjct 4218193 TTGTACATTTGCCAGATCTGATAGT 4218169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414316895160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |