Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-25 seq1 96.9 3e-15 >seq5 Length=5891385 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| ||| ||||||||||| ||||| ||||| | | Sbjct 1784906 CCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGAC 1784847 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||||||||| || || ||| | || || | |||||||||| ||| Sbjct 1784846 AGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 1784787 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| ||||| | | ||| || || | ||| | Sbjct 1784786 ATTCCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACT 1784727 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || | || |||||||| || ||||| Sbjct 1784726 TCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | || || | | ||||| ||||| || || Sbjct 1784360 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGCTTTCCG 1784301 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | |||||| ||| ||| | |||||||||||| |||||| || Sbjct 1784300 GCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 1784241 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| || ||| || | || |||||||||||||| | || Sbjct 1784240 ACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTC 1784181 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 1784180 TTGACGAAGATCTGCAT 1784164 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| |||||||| ||||| | ||||| || | ||||| ||||| || || Sbjct 1784648 GTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCG 1784589 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || |||| || | |||||| ||| ||| | ||| |||||||| ||||| || Sbjct 1784588 GCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 1784529 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | ||| |||||||| ||||| | || Sbjct 1784528 ACATTGTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTC 1784469 Query 21159 TTGAC 21163 ||||| Sbjct 1784468 TTGAC 1784464 >seq1 Length=8787864 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| |||||||| || ||||| ||||| |||||| || | ||| Sbjct 8578513 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 8578572 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| || | || || | |||||||||| ||| | || |||||||| Sbjct 8578573 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 8578632 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || | |||| || | ||| || ||| Sbjct 8578633 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 8578692 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || || || | || ||||| || || ||||||||| Sbjct 8578693 TTACCCGTAAGGGTCTTGACGAAGATCTGCATTTTG 8578728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259133098308