Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 9e-42
seq6 129 6e-25
seq5 129 6e-25
>seq1
Length=8787864
Score = 185 bits (204), Expect = 9e-42
Identities = 315/454 (69%), Gaps = 2/454 (0%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| || |||||| | | | ||| | |||| | |||||
Sbjct 4218581 AGAAGGCCGACTGGGCTCTCAAGTGGATCACTGACGAGGAGTCGACCTTTGCTCAGCGCT 4218640
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|| | ||||| || ||||||||||| ||||||| || ||||||| |||| || |
Sbjct 4218641 TGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATCTTCT 4218700
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|| | ||||| || || || ||||| || ||||| ||| ||||||||||||||| | |
Sbjct 4218701 GGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 4218760
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
|||||||||| || |||||| || || ||| ||||| || | | || || |
Sbjct 4218761 ACGAGGGTCTCCACACCGACTTCGCTTGCTTGTTGTTCTCTCACCTCAACAACCGCCCCA 4218820
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| || | ||| | ||||| | |||||| |||| ||||||||| ||||| |
Sbjct 4218821 GCAAGGAGATTGTCCAGAAGATCATTGTCGACGCTGTCGAGATCGAGCAGGAGTTCCTGA 4218880
Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340
|||| || ||||| |||| |||||| || | || | | | ||| ||| |||||
Sbjct 4218881 CCGAGGCTCTGCC-CTGCGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATT 4218939
Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400
||||||||||||||| | ||||| ||| || | | || ||| |||| | | ||
Sbjct 4218940 GAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACGAGAAGGTCTACCGCTCCACC 4218999
Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||| | ||||| ||| | ||||||| |||
Sbjct 4219000 AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4219033
Score = 176 bits (194), Expect = 5e-39
Identities = 243/335 (73%), Gaps = 9/335 (3%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| |||| || |||||||| | |||||| | || |||
Sbjct 4218177 ATCTGGCAAATGTACAAGAAGGCTCAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTG 4218236
Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | | || |||| |||||| | ||||||
Sbjct 4218237 TCCAAGGATCTCCA-CGACTGGAACAACAAGATCAACGAAGACGAGCAATACTTCATCTC 4218295
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct 4218296 CCACATCCTGGCCTTCTTCGCCGCCTCTGACGGCATCGTCAATGAGAACCTGGTTGAGCG 4218355
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|||| ||||| ||| | ||||||| || ||||||||||| || |||||| ||
Sbjct 4218356 TTTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTTCTACGGTTTCCAGATCATGAT 4218415
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG 116929
||||||| | ||||| || | || ||| |||||||| || ||| | | | | |
Sbjct 4218416 GGAGAACATTCACTCCGAGACCTACTCGCTGCTCATCGATACCTACATCAGGGAGCCTAA 4218475
Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGAC 116964
| | ||| || | ||||| |||||||| |||||
Sbjct 4218476 GCAGCGAACCTAC--TTGTTCAACGCCATTGAGAC 4218508
Score = 143 bits (158), Expect = 3e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || || ||||| || || |||||| | || || || |
Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | ||||| || || | ||||| ||||| || ||| |||||
Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 8578608
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | |||||||| | |||||||
Sbjct 8578607 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 8578548
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||||| | || || || || || |||||
Sbjct 8578547 AACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCGC 8578509
>seq6
Length=3941639
Score = 129 bits (142), Expect = 6e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| |||| || || | |||||| | |
Sbjct 189387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 189328
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| |||||| |||||||||| || ||
Sbjct 189327 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTG 189268
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || ||||| || || | |||||||| | |||||||||||||||||||
Sbjct 189267 ATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 189208
Query 40879 G 40879
|
Sbjct 189207 G 189207
>seq5
Length=5891385
Score = 129 bits (142), Expect = 6e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || ||||| || || ||||||||| |||| || ||| | |||||| | |
Sbjct 1784462 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCG 1784521
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | ||||| || |||| ||||| |||||||||||| |||| ||||| || || |
Sbjct 1784522 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGA 1784581
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| | ||| || || ||||| || || | |||||||| |||||||||||| |||||||
Sbjct 1784582 TTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGG 1784641
Query 40880 AGGCCACGCTGCATCTAGT 40898
|| |||| || || || ||
Sbjct 1784642 AGTCCACCCTCCACCTTGT 1784660
Score = 118 bits (130), Expect = 1e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || |||||||| || |||||||| | || || || | |
Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || |||| ||||| ||||| |||||| |||||||
Sbjct 1784740 GACACAATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 1784798
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| || || || |||||||| |||| || ||||| ||||||||
Sbjct 1784799 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAA 1784858
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||| |||||| | || |||||
Sbjct 1784859 CATCCAAAAGGAGTCGACTCTGCA 1784882
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| |||||||| | || ||||| || |
Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||||| || || | ||||| || ||||| ||| |||| |||
Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || || || ||||| || || | || || ||| ||||||||||
Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || || || ||
Sbjct 1784344 ATCCAGAAGGAGTCCACCCTCCACCTTGT 1784372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219116276880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |