Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 185 9e-42 seq6 129 6e-25 seq5 129 6e-25 >seq1 Length=8787864 Score = 185 bits (204), Expect = 9e-42 Identities = 315/454 (69%), Gaps = 2/454 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| || |||||| | | | ||| | |||| | ||||| Sbjct 4218581 AGAAGGCCGACTGGGCTCTCAAGTGGATCACTGACGAGGAGTCGACCTTTGCTCAGCGCT 4218640 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 || | ||||| || ||||||||||| ||||||| || ||||||| |||| || | Sbjct 4218641 TGATCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATCTTCT 4218700 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 || | ||||| || || || ||||| || ||||| ||| ||||||||||||||| | | Sbjct 4218701 GGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTG 4218760 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| || || ||| ||||| || | | || || | Sbjct 4218761 ACGAGGGTCTCCACACCGACTTCGCTTGCTTGTTGTTCTCTCACCTCAACAACCGCCCCA 4218820 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || || | ||| | ||||| | |||||| |||| ||||||||| ||||| | Sbjct 4218821 GCAAGGAGATTGTCCAGAAGATCATTGTCGACGCTGTCGAGATCGAGCAGGAGTTCCTGA 4218880 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 |||| || ||||| |||| |||||| || | || | | | ||| ||| ||||| Sbjct 4218881 CCGAGGCTCTGCC-CTGCGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATT 4218939 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 ||||||||||||||| | ||||| ||| || | | || ||| |||| | | || Sbjct 4218940 GAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACGAGAAGGTCTACCGCTCCACC 4218999 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||| | ||||| ||| | ||||||| ||| Sbjct 4219000 AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 4219033 Score = 176 bits (194), Expect = 5e-39 Identities = 243/335 (73%), Gaps = 9/335 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||| || |||||||| | |||||| | || ||| Sbjct 4218177 ATCTGGCAAATGTACAAGAAGGCTCAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTG 4218236 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | | || |||| |||||| | |||||| Sbjct 4218237 TCCAAGGATCTCCA-CGACTGGAACAACAAGATCAACGAAGACGAGCAATACTTCATCTC 4218295 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | |||||||| ||||||||| |||||||||||||| ||||| ||||| ||||| Sbjct 4218296 CCACATCCTGGCCTTCTTCGCCGCCTCTGACGGCATCGTCAATGAGAACCTGGTTGAGCG 4218355 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 |||| ||||| ||| | ||||||| || ||||||||||| || |||||| || Sbjct 4218356 TTTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTTCTACGGTTTCCAGATCATGAT 4218415 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG 116929 ||||||| | ||||| || | || ||| |||||||| || ||| | | | | | Sbjct 4218416 GGAGAACATTCACTCCGAGACCTACTCGCTGCTCATCGATACCTACATCAGGGAGCCTAA 4218475 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGAC 116964 | | ||| || | ||||| |||||||| ||||| Sbjct 4218476 GCAGCGAACCTAC--TTGTTCAACGCCATTGAGAC 4218508 Score = 143 bits (158), Expect = 3e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || ||||| || || |||||| | || || || | Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | ||||| || || | ||||| ||||| || ||| ||||| Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 8578608 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| ||||| |||||||| || | |||||||| | ||||||| Sbjct 8578607 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 8578548 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||||| | || || || || || ||||| Sbjct 8578547 AACATCCAGAAGGAGTCGACTCTTCACCTGGTCCTGCGC 8578509 >seq6 Length=3941639 Score = 129 bits (142), Expect = 6e-25 Identities = 137/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| || || | |||||| | | Sbjct 189387 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 189328 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| |||||| |||||||||| || || Sbjct 189327 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTG 189268 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || || | |||||||| | ||||||||||||||||||| Sbjct 189267 ATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 189208 Query 40879 G 40879 | Sbjct 189207 G 189207 >seq5 Length=5891385 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || ||||| || || ||||||||| |||| || ||| | |||||| | | Sbjct 1784462 TCGTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCG 1784521 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | ||||| || |||| ||||| |||||||||||| |||| ||||| || || | Sbjct 1784522 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGA 1784581 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 | | ||| || || ||||| || || | |||||||| |||||||||||| ||||||| Sbjct 1784582 TTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGG 1784641 Query 40880 AGGCCACGCTGCATCTAGT 40898 || |||| || || || || Sbjct 1784642 AGTCCACCCTCCACCTTGT 1784660 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||||||| || |||||||| | || || || | | Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||| |||||| ||||||| Sbjct 1784740 GACACAATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 1784798 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || |||||||| |||| || ||||| |||||||| Sbjct 1784799 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAA 1784858 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| |||||| | || ||||| Sbjct 1784859 CATCCAAAAGGAGTCGACTCTGCA 1784882 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| |||||||| | || ||||| || | Sbjct 1784164 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCG 1784223 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||||| || || | ||||| || ||||| ||| |||| ||| Sbjct 1784224 GATACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 1784283 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || || | || || ||| |||||||||| Sbjct 1784284 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCCGACTACAAC 1784343 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 1784344 ATCCAGAAGGAGTCCACCCTCCACCTTGT 1784372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219116276880