Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq5 116 2e-21 seq1 107 1e-18 seq6 86.0 4e-12 >seq5 Length=5891385 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || || || ||||||||||| ||||| ||| |||| Sbjct 1784891 AGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCC 1784832 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || ||||| ||||||||||| ||| | | ||||||||| Sbjct 1784831 TCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 1784772 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | ||| || || |||| |||||||| Sbjct 1784771 TGAATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTC 1784712 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || |||||||||||||| Sbjct 1784711 TTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| | || || | |||||| || || || Sbjct 1784354 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAG 1784295 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||| || ||| | || |||||||| ||||| ||| | || | Sbjct 1784294 ATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTG 1784235 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | |||||||| |||||||| || || || || Sbjct 1784234 TCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACG 1784175 Query 34379 AAGATCTGCATCGC 34392 |||||||||||||| Sbjct 1784174 AAGATCTGCATCGC 1784161 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| |||||||||||||| Sbjct 1784678 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAT 1784619 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || |||||||| || |||||||| || ||| Sbjct 1784618 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGG 1784559 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| |||||| || Sbjct 1784558 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCACC 1784499 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| || |||||||| || || || Sbjct 1784498 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGAC 1784464 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||| ||| | |||| || ||||| |||||||| || | Sbjct 1785134 CCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACTC 1785075 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| || || || || ||||||||||| ||| Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGACT 1784955 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| || || || ||||| || || || || || |||||||| Sbjct 1784954 TCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908 >seq1 Length=8787864 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| |||||||| | ||| || ||||| |||||||||||| | Sbjct 8578498 CCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 8578557 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||||||||| ||||| || || ||||||||||| ||| Sbjct 8578558 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 8578617 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | |||| || || || Sbjct 8578618 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8578677 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || || || || || || ||||||||||| Sbjct 8578678 TCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724 >seq6 Length=3941639 Score = 86.0 bits (94), Expect = 4e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || | |||||| || ||||| || Sbjct 189209 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATC 189268 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | | ||||||||| ||||| ||| | || | | Sbjct 189269 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 189328 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | |||| || || || || | |||||||| ||||| || || || ||||| ||| Sbjct 189329 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 189388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071948813280