Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq9 111 3e-19
seq7 93.3 9e-14
>seq9
Length=1670757
Score = 111 bits (122), Expect = 3e-19
Identities = 266/403 (66%), Gaps = 26/403 (6%)
Strand=Plus/Plus
Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058
|||| || || |||| ||| |||| |||||||| || |||||||| || ||||||||||
Sbjct 226232 ACCTACCGCACATGCTCTTCTACGGGCCTCCCGGCACGGGCAAGACTTCGACCATCCTGG 226291
Query 254059 CGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACG 254118
|| ||||| | | || | || |||| | ||||| || ||||| || |
Sbjct 226292 CGTTGGCCAAGGAGTTATATGGACCCGAGATGATGAAGGCCCGCGTCCTGGAGCTCAATG 226351
Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGT 254178
| || ||||| || || | | |||||||||| ||| ||||| ||| || |||
Sbjct 226352 CCTCCGACGAGCGTGGTATCTCCATCGTCCGCGAGAAGGTCAAGGATTTTGCCCGTATGC 226411
Query 254179 CGATTTCGTC-------------GTTCCAA---------CCCGGCTGTCCGCCTTTCAAG 254216
| | |||| | | ||| ||||| || ||||| ||||||
Sbjct 226412 AGCT--CGTCAACCCCCCGCCGGGCTACAAGGACCGCTACCCGG-TG-CCGCCCTTCAAG 226467
Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276
|| | || || |||||||| |||| |||||| ||||||||||| || || | ||
Sbjct 226468 ATCATCATTCTCGACGAGGCCGACAGCATGACACAGGACGCGCAGTCGGCGCTGAGGCGG 226527
Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336
|| ||||| ||| || | | ||||| || |||||| | ||||||||||| | | |
Sbjct 226528 ACTATGGAAACGTACAGCAAGATCACGCGATTCTGCCTGATTTGCAACTACGTCACAAGG 226587
Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||| | || || || | ||| ||||||||| ||||
Sbjct 226588 ATCATTGATCCCCTCGCCAGCAGATGCAGCAAGTTTCGCTTCA 226630
>seq7
Length=2844112
Score = 93.3 bits (102), Expect = 9e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 254022 GGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGGGC 254081
|| || ||||| || ||||||||||| ||||||||||| || || | | | | |||
Sbjct 2224166 GGCCCACCCGGTACCGGCAAGACGTCGACCATCCTGGCCCTCGCGAGGCGCATCTACGGC 2224107
Query 254082 GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGAC 254141
||| ||||||| | || || |||||||| ||||| || ||||| || || | |||
Sbjct 2224106 GAGCAGAACATGCGGCAGATGGTCCTCGAGCTCAACGCCTCCGACGACCGAGGTATCGAC 2224047
Query 254142 GTCGTCCGCGACAAGATCAAGACTTT 254167
|| || ||||| |||||||||| ||
Sbjct 2224046 GTGGTGCGCGAGCAGATCAAGACGTT 2224021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766221150784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |