Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq9 111 3e-19 seq7 93.3 9e-14 >seq9 Length=1670757 Score = 111 bits (122), Expect = 3e-19 Identities = 266/403 (66%), Gaps = 26/403 (6%) Strand=Plus/Plus Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058 |||| || || |||| ||| |||| |||||||| || |||||||| || |||||||||| Sbjct 226232 ACCTACCGCACATGCTCTTCTACGGGCCTCCCGGCACGGGCAAGACTTCGACCATCCTGG 226291 Query 254059 CGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACG 254118 || ||||| | | || | || |||| | ||||| || ||||| || | Sbjct 226292 CGTTGGCCAAGGAGTTATATGGACCCGAGATGATGAAGGCCCGCGTCCTGGAGCTCAATG 226351 Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGATGT 254178 | || ||||| || || | | |||||||||| ||| ||||| ||| || ||| Sbjct 226352 CCTCCGACGAGCGTGGTATCTCCATCGTCCGCGAGAAGGTCAAGGATTTTGCCCGTATGC 226411 Query 254179 CGATTTCGTC-------------GTTCCAA---------CCCGGCTGTCCGCCTTTCAAG 254216 | | |||| | | ||| ||||| || ||||| |||||| Sbjct 226412 AGCT--CGTCAACCCCCCGCCGGGCTACAAGGACCGCTACCCGG-TG-CCGCCCTTCAAG 226467 Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276 || | || || |||||||| |||| |||||| ||||||||||| || || | || Sbjct 226468 ATCATCATTCTCGACGAGGCCGACAGCATGACACAGGACGCGCAGTCGGCGCTGAGGCGG 226527 Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336 || ||||| ||| || | | ||||| || |||||| | ||||||||||| | | | Sbjct 226528 ACTATGGAAACGTACAGCAAGATCACGCGATTCTGCCTGATTTGCAACTACGTCACAAGG 226587 Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||||| | || || || | ||| ||||||||| |||| Sbjct 226588 ATCATTGATCCCCTCGCCAGCAGATGCAGCAAGTTTCGCTTCA 226630 >seq7 Length=2844112 Score = 93.3 bits (102), Expect = 9e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 254022 GGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGTTGGGC 254081 || || ||||| || ||||||||||| ||||||||||| || || | | | | ||| Sbjct 2224166 GGCCCACCCGGTACCGGCAAGACGTCGACCATCCTGGCCCTCGCGAGGCGCATCTACGGC 2224107 Query 254082 GAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGTTGGAC 254141 ||| ||||||| | || || |||||||| ||||| || ||||| || || | ||| Sbjct 2224106 GAGCAGAACATGCGGCAGATGGTCCTCGAGCTCAACGCCTCCGACGACCGAGGTATCGAC 2224047 Query 254142 GTCGTCCGCGACAAGATCAAGACTTT 254167 || || ||||| |||||||||| || Sbjct 2224046 GTGGTGCGCGAGCAGATCAAGACGTT 2224021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766221150784