Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 131 3e-25 seq3 91.5 3e-13 >seq1 Length=8787864 Score = 131 bits (144), Expect = 3e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 ||||||||||| || || || |||||||| |||||||| ||||| ||||| |||||| | Sbjct 4218646 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATCTTCTGGTTG 4218705 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||||| | ||| | |||||||||| |||| |||||| ||| |||| ||| | ||||| Sbjct 4218706 AAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 4218765 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||||| || |||||| || ||| || |||| Sbjct 4218766 GGTCTCCACACCGACTTCGCTTGCTTGTTGTT 4218797 >seq3 Length=6663688 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||| || ||||| || |||||||||| |||| ||||| ||||| | | ||||| || Sbjct 2588897 GCCCTCGGCCTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCGTAGCAGTCGGCGAG 2588838 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCA 94490 |||||||||||||| |||||||||||||| ||| Sbjct 2588837 GCCAGGGCACTCGTTGGGGCACATCAGGGTCCA 2588805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583835172415