Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 3e-25
seq3 91.5 3e-13
>seq1
Length=8787864
Score = 131 bits (144), Expect = 3e-25
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
||||||||||| || || || |||||||| |||||||| ||||| ||||| |||||| |
Sbjct 4218646 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATCTTCTGGTTG 4218705
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
||||| | ||| | |||||||||| |||| |||||| ||| |||| ||| | |||||
Sbjct 4218706 AAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 4218765
Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||||| || |||||| || ||| || ||||
Sbjct 4218766 GGTCTCCACACCGACTTCGCTTGCTTGTTGTT 4218797
>seq3
Length=6663688
Score = 91.5 bits (100), Expect = 3e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457
||| || ||||| || |||||||||| |||| ||||| ||||| | | ||||| ||
Sbjct 2588897 GCCCTCGGCCTCGTACTTCTCGTACAGGGCCTCGAACTCATCGCCGTAGCAGTCGGCGAG 2588838
Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCA 94490
|||||||||||||| |||||||||||||| |||
Sbjct 2588837 GCCAGGGCACTCGTTGGGGCACATCAGGGTCCA 2588805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583835172415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |