Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3 194 2e-44
seq1 104 3e-17
>seq3
Length=6663688
Score = 194 bits (214), Expect = 2e-44
Identities = 464/695 (67%), Gaps = 10/695 (1%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| || || | || ||||||| | ||| || |||| | || || || ||||| ||
Sbjct 2588834 AGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAA 2588775
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
||| || |||||||| || || | || || || | | | ||||| |||||
Sbjct 2588774 GAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCGTG 2588715
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| || || |||||| | | | ||| || ||||| || || | ||| |||||
Sbjct 2588714 GTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATGGC 2588655
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | ||||| || ||||| || ||||| || | |||||| || ||||| || | ||
Sbjct 2588654 AAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGAC 2588595
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| | ||| || | |||||||| || | || ||||| |||| || || |||| |
Sbjct 2588594 ACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCAGT 2588535
Query 63521 GGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
|||||| || | |||| |||| ||||| || ||||| || ||||| | |||
Sbjct 2588534 GGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCATGGCG 2588477
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| || || ||||| ||||| |||||| || || ||
Sbjct 2588476 CAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGAAG 2588417
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| ||| | || | | ||| || || || || | ||| || || ||||| ||
Sbjct 2588416 CAAGAAGAGAGCTGAGCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCGTGTGTG 2588357
Query 63699 AACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63757
|| | || | || | |||| ||||| |||||||| | || | ||| || |
Sbjct 2588356 AAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATC--ATCGCCC 2588300
Query 63758 AA--TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815
| | || || || |||||||| | ||||||||||||||| || |||| ||| |||
Sbjct 2588299 CAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTGCCGTTG 2588240
Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875
|| ||||| | ||||||| |||| ||| || || ||||| || | ||| |||||
Sbjct 2588239 ATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCG 2588180
Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| ||||| | ||| |||| | |||| |||||
Sbjct 2588179 CGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145
>seq1
Length=8787864
Score = 104 bits (114), Expect = 3e-17
Identities = 155/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| ||| || ||||| ||| ||| ||||||||||| | | || | ||||| ||
Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || || ||||| || |||||||| || | ||| || ||||| ||||| | ||
Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC- 33750
|||||||| || || || ||||||||||| || | | || || | || | |
Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618
Query 33751 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
|||| |||||||| ||||||| |||||||||||
Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817497654640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |