Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 seq1 98.7 1e-15 >seq3 Length=6663688 Score = 190 bits (210), Expect = 3e-43 Identities = 468/701 (67%), Gaps = 18/701 (3%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||| || || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 2588836 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATG 2588777 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 ||||| || |||||||| || || | || | || | || | ||||| ||||| Sbjct 2588776 AAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCG 2588717 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| || || |||||| | | | ||| | ||||| || || | ||| ||| Sbjct 2588716 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATG 2588657 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | ||||| || ||||| || ||||| || | |||||| || ||||| || | Sbjct 2588656 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAG 2588597 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | | ||| || | ||||| ||||| || || ||||| |||| || || |||| Sbjct 2588596 ACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCA 2588537 Query 66312 CTTGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | ||||| || | |||| |||| ||||| || ||||| || ||||| | | Sbjct 2588536 GTGGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCATGG 2588479 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 |||| || | || || ||||| ||||| || || |||||| |||||| || || | Sbjct 2588478 CGCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGA 2588419 Query 66430 AACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCG 66485 | || ||| | | ||| | || ||| || || || || | ||| || || ||| Sbjct 2588418 AGCAAGAAGAGA---GCTGA-GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCG 2588363 Query 66486 TGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544 || || || | || | || | |||| ||||| |||||||| | || | ||| | Sbjct 2588362 TGTGTGAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATC--A 2588306 Query 66545 TTGATGAA--TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 | | | | || || || |||||||| | ||||||||||||||| || | |||||| Sbjct 2588305 TCGCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTG 2588246 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662 ||| || ||||| | ||||||| |||| ||| || || ||||| || | ||| Sbjct 2588245 CCGTTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 2588186 Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 ||||| || ||||| | ||| |||||| || | ||||| Sbjct 2588185 AAGTCGCGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145 >seq1 Length=8787864 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| ||| || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| || |||||||| || | ||| || ||||| || || | ||| Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC- 36326 ||||| || || || || || |||||||| || | | || || | || | | Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618 Query 36327 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 |||| |||||||| ||||||| ||||||||||| Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172693046920