Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 190 3e-43
seq1 98.7 1e-15
>seq3
Length=6663688
Score = 190 bits (210), Expect = 3e-43
Identities = 468/701 (67%), Gaps = 18/701 (3%)
Strand=Plus/Minus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| || || | || ||||||| | ||| || |||| | || || || |||||
Sbjct 2588836 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATG 2588777
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
||||| || |||||||| || || | || | || | || | ||||| |||||
Sbjct 2588776 AAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCG 2588717
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
||||| || || |||||| | | | ||| | ||||| || || | ||| |||
Sbjct 2588716 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATG 2588657
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | ||||| || ||||| || ||||| || | |||||| || ||||| || |
Sbjct 2588656 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAG 2588597
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | | ||| || | ||||| ||||| || || ||||| |||| || || ||||
Sbjct 2588596 ACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCA 2588537
Query 66312 CTTGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| ||||| || | |||| |||| ||||| || ||||| || ||||| | |
Sbjct 2588536 GTGGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCATGG 2588479
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
|||| || | || || ||||| ||||| || || |||||| |||||| || || |
Sbjct 2588478 CGCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGA 2588419
Query 66430 AACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCG 66485
| || ||| | | ||| | || ||| || || || || | ||| || || |||
Sbjct 2588418 AGCAAGAAGAGA---GCTGA-GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCG 2588363
Query 66486 TGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 66544
|| || || | || | || | |||| ||||| |||||||| | || | ||| |
Sbjct 2588362 TGTGTGAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATC--A 2588306
Query 66545 TTGATGAA--TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602
| | | | || || || |||||||| | ||||||||||||||| || | ||||||
Sbjct 2588305 TCGCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTG 2588246
Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 66662
||| || ||||| | ||||||| |||| ||| || || ||||| || | |||
Sbjct 2588245 CCGTTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 2588186
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
||||| || ||||| | ||| |||||| || | |||||
Sbjct 2588185 AAGTCGCGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145
>seq1
Length=8787864
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| ||| || ||||| ||| ||| ||||||||||| | | || | ||||||||
Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || || ||||| || |||||||| || | ||| || ||||| || || | |||
Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC- 36326
||||| || || || || || |||||||| || | | || || | || | |
Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618
Query 36327 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
|||| |||||||| ||||||| |||||||||||
Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172693046920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |