Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq5 82.4 8e-11 >seq1 Length=8787864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||||| || ||||| || || ||||| || ||||||| |||| Sbjct 8578510 CGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 8578569 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || ||||| ||||||| || ||||| || || || || || || ||| Sbjct 8578570 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 8578629 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||||||||||| ||| | Sbjct 8578630 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 8578689 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | || || ||||| || ||||| Sbjct 8578690 GTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724 >seq5 Length=5891385 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || ||| ||||||| || |||||||| || || |||||||| ||| Sbjct 1784318 TCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTG 1784259 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || || | || ||| ||||||| || | Sbjct 1784258 TCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATG 1784199 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGC 139767 ||||||||||| | || || ||||| || ||||| || Sbjct 1784198 GTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATCGC 1784161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063919389600