Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 163 4e-35 seq1 131 2e-25 >seq3 Length=6663688 Score = 163 bits (180), Expect = 4e-35 Identities = 389/574 (68%), Gaps = 18/574 (3%) Strand=Plus/Plus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864 ||| ||||| | | ||| || | ||||| ||||| | | | ||| || || || Sbjct 2588555 AACCAACGGAACCTCCAACGGTATCGTGCCCATGCTTCGTGTCTTCAACAACACTGCCA- 2588613 Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||| ||||| || || || || || | ||| ||||| | || |||| Sbjct 2588614 GATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTTGCCATCTACCTCGAGCCTT 2588673 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| |||| || || || || | || | ||||| ||| || || |||| | Sbjct 2588674 GGCACTCGGATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGAAAGGAGGAGGTCC 2588733 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---A 97041 | ||| | ||| |||| || |||||| | || || | ||||||||||| ||| | Sbjct 2588734 GCGCCCGTGACCTGTTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGA 2588793 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | |||||| |||||| ||| ||||||||| || || || || || |||| |||| Sbjct 2588794 AGAACGGTG---ACTGGACCCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCT 2588850 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGA 97160 ||||| ||||| |||||| |||| | |||||| |||||||| || ||| Sbjct 2588851 ACGGCGATGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCCGAGGGCCGTGGTCGCAAGA 2588910 Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAA 97218 | | || |||| |||| || ||| | |||| || ||| ||||||| |||||||| | Sbjct 2588911 CTA-TCAGGGCAC-AGAAGCTCTGGTATGCCATTCTTGA-GGCTCAGACCGAGACTGGTA 2588967 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTG--AATCGCAACAGCAACCAACGCCACTTGGG 97276 || | ||| |||||||||| ||| || || ||||| |||||||| || | || Sbjct 2588968 ACCCCTTCATGCTCTACAAGG--ACCATGCCAACCGCAAGAGCAACCAGAAGAACCTTGG 2589025 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 || || ||||||| |||||||| || || | |||||| | | || |||||| Sbjct 2589026 AACTATTCGCAGCTCCAACCTGTGCACTGAGATCATTGAGTACTCGGCACCTGACGAGGT 2589085 Query 97337 GGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCC 97370 || || ||| ||||| || | ||||||| Sbjct 2589086 CGCCGTCTGCAACCTGGCCTCCTTGGCTCTGCCC 2589119 >seq1 Length=8787864 Score = 131 bits (144), Expect = 2e-25 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||||||||| ||||| ||||| | || ||| | |||||| Sbjct 4218177 ATCTGGCAAATGTACAAGAAGGCTCAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTG 4218236 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 |||||||| || |||| ||| | || | | || ||| |||| | | || || || Sbjct 4218237 TCCAAGGATCTCCACGACTGGAACAACAAGATCAAC-GAAGACGAGCAATACTTCATCTC 4218295 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 ||||| |||||||||| |||| ||| || || |||||||| || || || ||||| | Sbjct 4218296 CCACATCCTGGCCTTCTTCGCCGCCTCTGACGGCATCGTCAATGAGAACCTGGTTGA-GC 4218354 Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 | ||| ||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 4218355 GTTTCAGCGGCGAGGTCCAGATCCCCGAGGCACGATGCTTCTACGGTTTCCAGATCATGA 4218414 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTC 125284 | |||||| | ||||| || | ||||| Sbjct 4218415 TGGAGAACATTCACTCCGAGACCTACTC 4218442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059079577880