Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 111 4e-19 seq5 105 2e-17 >seq1 Length=8787864 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || | || || || || || || ||| Sbjct 8578528 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 8578587 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || ||||| || || ||||| ||||| | || Sbjct 8578588 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTG 8578647 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| || || ||||| || || ||||||||||| ||||| || Sbjct 8578648 ACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCCGTAAGGGTC 8578707 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 8578708 TTGACGAAGATCTGCATTTTG 8578728 >seq5 Length=5891385 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || ||||| ||||| || | || || Sbjct 1784664 AAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATC 1784605 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||| || ||||| || | ||| ||||| || || || || || || || Sbjct 1784604 CTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTC 1784545 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || ||||| || | ||| ||| | ||| ||||| || || || || Sbjct 1784544 CTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGT 1784485 Query 104527 CTTACCAGTAAGTGTTTTTAC 104547 ||| || || || || || || Sbjct 1784484 CTTTCCGGTGAGGGTCTTGAC 1784464 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| || |||| ||||| || || || || ||| Sbjct 1784876 GTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCCAGCTGCTTACCA 1784817 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 ||||| || || | ||| || || || || ||||| || || ||||||||| ||||| || Sbjct 1784816 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATC-TTGCTCTT 1784758 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | || || || | ||| || ||||| || || || || Sbjct 1784757 CACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTTTCCCGTGAGGGT 1784698 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1784697 CTTGACAAAGATCTGCAT 1784680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398208220204