Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
>seq1
Length=8787864
Score = 138 bits (152), Expect = 1e-27
Identities = 184/253 (73%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561
|||| ||| ||||| ||||| ||||| | | | || || || || |||||
Sbjct 1569647 CGCCGGTGCTGCCGAAGCCGCCGGCGCCGCGGACGCTCTCCTCGAGCTCGGCGACCTCGA 1569706
Query 5562 CCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620
|||| |||||| | || ||||||| || ||||| || | ||||||||| |
Sbjct 1569707 CCACGTCGGGGGT-GTAGATGCGCTCGATGACGAGCTGGGCGACGCGGTCGCCCTCGCTC 1569765
Query 5621 ACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680
||| | || ||| || || | ||||||||||| || || | ||| |||||||||
Sbjct 1569766 ACCGCAAAGTCGGCGTCGCTGTGGTTGAACAGCAGTACCTTGACCTGGCCCCGGTAGTCG 1569825
Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740
||||| || |||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct 1569826 GCGTCGATGACGCCCGCGCCCGTGTCGATGAAGTGCTTGGCGGCCAGGCCGGAGCGGGGG 1569885
Query 5741 GCCACGCGGCCGT 5753
|| | ||||||||
Sbjct 1569886 GCGATGCGGCCGT 1569898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430054331863256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |