Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 4e-14
>seq5
Length=5891385
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| ||||||||||| || | | || | ||||| ||||||
Sbjct 1784654 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGC 1784595
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || |||| | ||||||||||||| || | | ||||||||| ||| |||
Sbjct 1784594 TTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTC 1784535
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | ||||| |||| || ||| ||||| || ||||| || ||||||
Sbjct 1784534 GACTTGACATTGTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTG 1784475
Query 48704 AGAGTTTTCAC 48714
|| || || ||
Sbjct 1784474 AGGGTCTTGAC 1784464
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | | | ||| || || || || ||||||||| |||||||| ||||
Sbjct 1784907 ACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGA 1784848
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| ||| ||||||||||||||||||| | | || | ||||||||| ||| ||
Sbjct 1784847 CAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 1784788
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676
| | ||||||||| ||| || ||| | | | || || || || | |||||
Sbjct 1784787 GATTCCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCG--ATTGTGTCCGACGACTCA 1784730
Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| ||||| || || ||||| || || ||||| ||||||||
Sbjct 1784729 ACTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251133258013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |