Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 >seq5 Length=5891385 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| ||||||||||| || | | || | ||||| |||||| Sbjct 1784654 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGC 1784595 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || |||| | ||||||||||||| || | | ||||||||| ||| ||| Sbjct 1784594 TTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGAATCTTC 1784535 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| |||| || ||| ||||| || ||||| || |||||| Sbjct 1784534 GACTTGACATTGTCGATGGTGTCGGACGATTCCACCTCGAGGGTGATGGTCTTTCCGGTG 1784475 Query 48704 AGAGTTTTCAC 48714 || || || || Sbjct 1784474 AGGGTCTTGAC 1784464 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | | ||| || || || || ||||||||| |||||||| |||| Sbjct 1784907 ACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGA 1784848 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || ||| ||||||||||||||||||| | | || | ||||||||| ||| || Sbjct 1784847 CAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 1784788 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | ||||||||| ||| || ||| | | | || || || || | ||||| Sbjct 1784787 GATTCCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCG--ATTGTGTCCGACGACTCA 1784730 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||| ||||| || || ||||| || || ||||| |||||||| Sbjct 1784729 ACTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251133258013