Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 3e-16
seq5 96.9 3e-15
>seq1
Length=8787864
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| |||| ||| | ||| || ||||| || | ||| || ||||||| ||| | |
Sbjct 8578510 CGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 8578569
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || | ||||| | | ||||| || || ||||| || || |||
Sbjct 8578570 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 8578629
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | |||||| | ||| ||||| | || || |||| |||||
Sbjct 8578630 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 8578689
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || || |||||||||||
Sbjct 8578690 GTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724
>seq5
Length=5891385
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| |||||| ||||||| | | |||||||| || ||||| ||||| ||
Sbjct 1784319 ATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTT 1784260
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || || | |||||| | | | || || | | ||||| |||| |||||
Sbjct 1784259 GTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGAT 1784200
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || || ||||| || || || |||||||||||
Sbjct 1784199 GGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| ||| || |||||||| | ||| || || || || | |||||
Sbjct 1784889 CACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTC 1784830
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || ||||||| | | ||||| || || || || || || ||||| |
Sbjct 1784829 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTG 1784770
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||| ||| | ||| ||||| | || || || | |||||||| ||
Sbjct 1784769 AATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTT 1784710
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || || || || ||||||||||||||
Sbjct 1784709 TCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291127152680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |