Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq5 96.9 3e-15 >seq1 Length=8787864 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| ||| | ||| || ||||| || | ||| || ||||||| ||| | | Sbjct 8578510 CGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 8578569 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | ||||| | | ||||| || || ||||| || || ||| Sbjct 8578570 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 8578629 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | |||||| | ||| ||||| | || || |||| ||||| Sbjct 8578630 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 8578689 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || || || ||||||||||| Sbjct 8578690 GTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 8578724 >seq5 Length=5891385 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| |||||| ||||||| | | |||||||| || ||||| ||||| || Sbjct 1784319 ATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTT 1784260 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || | |||||| | | | || || | | ||||| |||| ||||| Sbjct 1784259 GTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGAT 1784200 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || ||||| || || || ||||||||||| Sbjct 1784199 GGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| ||| || |||||||| | ||| || || || || | ||||| Sbjct 1784889 CACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTC 1784830 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || ||||||| | | ||||| || || || || || || ||||| | Sbjct 1784829 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTG 1784770 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||| ||| | ||| ||||| | || || || | |||||||| || Sbjct 1784769 AATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCAACTTCCAATGTGATGGTCTT 1784710 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || |||||||||||||| Sbjct 1784709 TCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291127152680