Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 107 3e-19 seq3 107 3e-19 >seq4 Length=6441926 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | |||| ||||| || |||||||| || ||||||||||| ||||| Sbjct 1939442 GCCAAGCGCCACCGAAAGATC-CTTCGTGACAACATCCAGGGCATCACCAAGCCCGCTAT 1939384 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 1939383 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1939343 >seq3 Length=6663688 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 2392247 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 2392189 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| |||||||||||||| ||||||||| |||||| Sbjct 2392188 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 2392148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075188114009