Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 208 9e-49 seq1 116 5e-21 >seq3 Length=6663688 Score = 208 bits (230), Expect = 9e-49 Identities = 472/701 (67%), Gaps = 18/701 (3%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||| || || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 2588836 CCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATG 2588777 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 ||||| || |||||||| || || | || || || | || | ||||| ||||| Sbjct 2588776 AAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTTCCG 2588717 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| || || |||||| | | | ||| || ||||| || || | ||| ||| Sbjct 2588716 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAGATG 2588657 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | ||||| || ||||| || ||||| || | |||||| || ||||| || | Sbjct 2588656 GCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAG 2588597 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | | ||| || | |||||||| || | || ||||| |||| || || |||| Sbjct 2588596 ACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGATCCA 2588537 Query 63468 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 ||||||| || | |||| |||| ||||| || ||||| || ||||| | | Sbjct 2588536 GTGGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCATGG 2588479 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 |||| || | ||||| ||||||||||| ||||| ||||| |||||| || || | Sbjct 2588478 CGCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCAGGA 2588419 Query 63586 AACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63641 | || ||| | | ||| | || ||| || || || || | ||| || || ||| Sbjct 2588418 AGCAAGAAGAGA---GCTGA-GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAGGCG 2588363 Query 63642 TGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63700 || || || | || | || | |||| ||||| |||||||| | || | || || Sbjct 2588362 TGTGTGAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACAT--CA 2588306 Query 63701 TTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758 | | || || || || |||||||| | ||||||||||||||| || | |||||| Sbjct 2588305 TCGCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATCTTG 2588246 Query 63759 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63818 ||| || ||||| | ||||||| |||| ||| || || ||||| || | ||| Sbjct 2588245 CCGTTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAGTTG 2588186 Query 63819 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63859 ||||| || ||||| | ||| |||||| || | ||||| Sbjct 2588185 AAGTCGCGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145 >seq1 Length=8787864 Score = 116 bits (128), Expect = 5e-21 Identities = 158/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| ||| || ||||| ||| ||| ||||||||||| | | || || |||||||| Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| || |||||||| || | ||| || ||||| ||||| | ||| Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC- 33472 |||||||| || || || ||||||||||| || | | || || | || | | Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618 Query 33473 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 |||| |||||||| ||||||| ||||||||||| Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947098771080