Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 199 5e-46 seq1 98.7 1e-15 >seq3 Length=6663688 Score = 199 bits (220), Expect = 5e-46 Identities = 472/704 (67%), Gaps = 18/704 (3%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| || || | || ||||||| | ||| || |||| | || || || ||| Sbjct 2588839 AGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTC 2588780 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || ||||| || |||||||| || || | || || || | || | ||||| ||| Sbjct 2588779 ATGAAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTT 2588720 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || || |||||| | | | ||| || ||||| || || | ||| Sbjct 2588719 CCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAG 2588660 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | ||||| || ||||| || ||||| || | |||||| || ||||| || Sbjct 2588659 ATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTG 2588600 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | | ||| || | ||||| ||||| || || ||||| || | || || | Sbjct 2588599 AAGACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGAT 2588540 Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| || | |||| |||| ||||| || ||||| || ||||| | Sbjct 2588539 CCAGTGGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCA 2588482 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 ||||| || | || || ||||| ||||| || || |||||| |||||| || | Sbjct 2588481 TGGCGCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCA 2588422 Query 63438 GAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAA 63493 | || || ||| | | ||| | || ||| || || || || | ||| || || Sbjct 2588421 GGAAGCAAGAAGAGA---GCTGA-GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAG 2588366 Query 63494 GCGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATC 63552 ||||| || || | || | || | |||| ||||| |||||||| | || | ||| Sbjct 2588365 GCGTGTGTGAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATC 2588307 Query 63553 CCATTGATGAA--TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 63610 || | | | || || || |||||||| | ||||||||||||||| || | ||| Sbjct 2588306 --ATCGCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATC 2588249 Query 63611 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63670 ||| ||| || ||||| | ||||||| |||| ||| || || ||||| || | ||| Sbjct 2588248 TTGCCGTTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAG 2588189 Query 63671 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || ||||| | ||| |||||| || | ||||| Sbjct 2588188 TTGAAGTCGCGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145 >seq1 Length=8787864 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||| || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || || ||||| || |||||||| || | ||| || ||||| || || | ||| Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC- 32829 ||||| || || || || || |||||||| || | | || || | || | | Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618 Query 32830 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||| |||||||| ||||||| ||||||||||| Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631897034800