Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3 199 5e-46
seq1 98.7 1e-15
>seq3
Length=6663688
Score = 199 bits (220), Expect = 5e-46
Identities = 472/704 (67%), Gaps = 18/704 (3%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| ||||| || || | || ||||||| | ||| || |||| | || || || |||
Sbjct 2588839 AGGCCAGGGCACTCGTTGGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACACGCTTC 2588780
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| ||||| || |||||||| || || | || || || | || | ||||| |||
Sbjct 2588779 ATGAAGAGGTCGGGAATCCAGAGGGCCAGGAACAGGTCACGGGCGCGGACCTCCTCCTTT 2588720
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || || |||||| | | | ||| || ||||| || || | |||
Sbjct 2588719 CCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCGAGGTAG 2588660
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | ||||| || ||||| || ||||| || | |||||| || ||||| ||
Sbjct 2588659 ATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTGGCAGTGTTGTTG 2588600
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| || | ||||| ||||| || || ||||| || | || || |
Sbjct 2588599 AAGACACGAAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCGGCAATGTAAGAT 2588540
Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
||| ||||||| || | |||| |||| ||||| || ||||| || ||||| |
Sbjct 2588539 CCAGTGGCACGGATGCGGTGGGCGTTGA--GACCGATTCCACCGGCCATCTTGGAGATCA 2588482
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
||||| || | || || ||||| ||||| || || |||||| |||||| || |
Sbjct 2588481 TGGCGCAGGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCAACCA 2588422
Query 63438 GAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAA 63493
| || || ||| | | ||| | || ||| || || || || | ||| || ||
Sbjct 2588421 GGAAGCAAGAAGAGA---GCTGA-GCCTGGGGAGTGCCGGCGTTGAAGAGGGTGGGGGAG 2588366
Query 63494 GCGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATC 63552
||||| || || | || | || | |||| ||||| |||||||| | || | |||
Sbjct 2588365 GCGTGTGTGAAGAACTTCTGGGACATGTAG-TTGTAGGTCTCAATGACCTTCTCGACATC 2588307
Query 63553 CCATTGATGAA--TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 63610
|| | | | || || || |||||||| | ||||||||||||||| || | |||
Sbjct 2588306 --ATCGCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATC 2588249
Query 63611 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63670
||| ||| || ||||| | ||||||| |||| ||| || || ||||| || | |||
Sbjct 2588248 TTGCCGTTGATCTTCAAGAGGTAGGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAG 2588189
Query 63671 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
||||| || ||||| | ||| |||||| || | |||||
Sbjct 2588188 TTGAAGTCGCGATCGTAGACAATGGCCGAGTCCAGCTCTTCCTT 2588145
>seq1
Length=8787864
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| ||| || ||||| ||| ||| ||||||||||| | | || | ||||||||
Sbjct 4218797 AACAACAAGCAAGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 4218738
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || || ||||| || |||||||| || | ||| || ||||| || || | |||
Sbjct 4218737 AAGGTCAGACCAGGCATCAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGCACCA 4218678
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCGC- 32829
||||| || || || || || |||||||| || | | || || | || | |
Sbjct 4218677 CTGAAGAAGATACCCTCGACGGCAGCAAAGGCGATCAAGCGCTGAGCAAAGGTCGACTCC 4218618
Query 32830 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
|||| |||||||| ||||||| |||||||||||
Sbjct 4218617 TCGTCAGTGATCCACTTGAGAGCCCAGTCGGCCTTCTT 4218580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631897034800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |