Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 6e-24
seq1 104 2e-17
>seq5
Length=5891385
Score = 125 bits (138), Expect = 6e-24
Identities = 132/174 (76%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || |||||| | |||| ||| | ||| || ||||
Sbjct 1784476 ACCGGAAAGACCATCACCCTCGAGGTGGAATCGTCCGACACCATCGACAATGTCAAGTCG 1784535
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 1784536 AAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGTCTGATTTTCGCCGGAAAG 1784595
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| ||||||| | ||||| ||||||||||| || || ||||||
Sbjct 1784596 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCCACC 1784649
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || ||| | || || ||||| || | |
Sbjct 1784908 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACGATTACGCTGGAAGTCGAGTCATCA 1784967
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || || |||||||||||||| || || || ||
Sbjct 1784968 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 1785027
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| ||||| ||||| |||||| ||||||| | |||||||||
Sbjct 1785028 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGCACCCTGAGTGATTACAAC 1785087
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || | || || ||| | || | || || |||
Sbjct 1785088 ATTCAGAAGGAGTCTACTCTGCACTTGGTTCTCCGTCTCCGTGGCGGT 1785135
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| | ||||| || | |
Sbjct 1784680 ATGCAGATCTTTGTCAAGACCCTCACGGGAAAGACCATCACATTGGAAGTTGAGTCGTCG 1784739
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || ||||| ||||||||||| || || || || ||
Sbjct 1784740 GACACAATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 1784799
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || || ||| | ||||| ||| ||| | || || ||||||
Sbjct 1784800 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGAACCCTGTCTGACTACAAC 1784859
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || || | || || || | || | || ||||||
Sbjct 1784860 ATCCAAAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGAGGT 1784907
>seq1
Length=8787864
Score = 104 bits (114), Expect = 2e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || || || || || | || ||||| || |||| ||||| ||||| |
Sbjct 8578727 AAAATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACTATCACCCTTGAGGTGGAGTCT 8578668
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| || |||| || || || ||||||||||| ||||| || ||
Sbjct 8578667 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 8578608
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || || ||||| ||| | |||||| ||||||| | ||| |||
Sbjct 8578607 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGAGCGACTAC 8578548
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || || ||
Sbjct 8578547 AACATCCAGAAGGAGTCGAC 8578528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727933499345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |