Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 4e-18
seq1 96.9 7e-15
>seq4
Length=6441926
Score = 107 bits (118), Expect = 4e-18
Identities = 156/218 (72%), Gaps = 8/218 (4%)
Strand=Plus/Plus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
||| | |||| |||||||||||||| || |||||||| ||||| || ||||| | ||
Sbjct 5916200 TCAAGAATTGCCGTCATTGGACCCAACGGAGCGGGTAAATCTACTCTGATCAAGATGTTG 5916259
Query 280221 ACTGGCGAGACC---CAGGCCACTGAGGGGTC-CGTTTGGAAGCATCCCAACATGCGGAT 280276
|| || |||||| | ||||| |||| ||| |||||| |||||| |||| ||
Sbjct 5916260 ACGGGTGAGACCATTCCTACCACT----GGTCGCGTCGAGAAGCACCCCAACTTGCGTAT 5916315
Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336
| ||| || ||||||||| | | ||| | |||| ||||| || | |||||| ||
Sbjct 5916316 CGGCTACATCAAGCAGCACGCTCTGGAGCACGTGGAGATGCACCTCGAAAAGACTCCCAA 5916375
Query 280337 CCAATACATTCAGTGGCGCTATGCAAGTGGGCAGGATC 280374
||| ||| | |||||| | || || | ||| | ||||
Sbjct 5916376 CCAGTACCTCCAGTGGAGATACGCCAATGGTGATGATC 5916413
>seq1
Length=8787864
Score = 96.9 bits (106), Expect = 7e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| || || ||||| ||||| || || || |||| ||||||||||| |||
Sbjct 5287450 GGTGAGGACCTTTGCAACTGTACCTTCTCCCTTGCCTACGGTGCCAAGATTCTGCTCAAC 5287391
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| |||||||||| ||| || ||||| ||||||||| || |
Sbjct 5287390 CAGACCCACCTGCGTCTCAAGCGTGGTCGCCGCTACGGTCTTTGCGGTCCCAACGGTTCC 5287331
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 5287330 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 5287272
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 5287271 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 5287230
Score = 84.2 bits (92), Expect = 4e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||||||| | ||| || ||||||| || || |||||||| || || |
Sbjct 5286078 CCAACTTCGGTCTGGACGCTGAGCTTGTCTCTCACTCGCGTATGCGCGGTCTGTCCGGTG 5286019
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| | || |||| |||||| | || ||| |||||||
Sbjct 5286018 GTCAGCGTGTCAAGGTCGTCCTGTCTGCTTGCTC-GTGGCAGCGACCCCACTTGATCGTC 5285960
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|| ||||||||||||||||| ||||||| || || || ||||||
Sbjct 5285959 CTTGACGAGCCTACCAACTACTTGGACCGTGACTCTCTCGGTGCTCTG 5285912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836628800933
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |