Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 107 4e-18 seq1 96.9 7e-15 >seq4 Length=6441926 Score = 107 bits (118), Expect = 4e-18 Identities = 156/218 (72%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 ||| | |||| |||||||||||||| || |||||||| ||||| || ||||| | || Sbjct 5916200 TCAAGAATTGCCGTCATTGGACCCAACGGAGCGGGTAAATCTACTCTGATCAAGATGTTG 5916259 Query 280221 ACTGGCGAGACC---CAGGCCACTGAGGGGTC-CGTTTGGAAGCATCCCAACATGCGGAT 280276 || || |||||| | ||||| |||| ||| |||||| |||||| |||| || Sbjct 5916260 ACGGGTGAGACCATTCCTACCACT----GGTCGCGTCGAGAAGCACCCCAACTTGCGTAT 5916315 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336 | ||| || ||||||||| | | ||| | |||| ||||| || | |||||| || Sbjct 5916316 CGGCTACATCAAGCAGCACGCTCTGGAGCACGTGGAGATGCACCTCGAAAAGACTCCCAA 5916375 Query 280337 CCAATACATTCAGTGGCGCTATGCAAGTGGGCAGGATC 280374 ||| ||| | |||||| | || || | ||| | |||| Sbjct 5916376 CCAGTACCTCCAGTGGAGATACGCCAATGGTGATGATC 5916413 >seq1 Length=8787864 Score = 96.9 bits (106), Expect = 7e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| || || ||||| ||||| || || || |||| ||||||||||| ||| Sbjct 5287450 GGTGAGGACCTTTGCAACTGTACCTTCTCCCTTGCCTACGGTGCCAAGATTCTGCTCAAC 5287391 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| |||||||||| ||| || ||||| ||||||||| || | Sbjct 5287390 CAGACCCACCTGCGTCTCAAGCGTGGTCGCCGCTACGGTCTTTGCGGTCCCAACGGTTCC 5287331 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 5287330 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 5287272 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 5287271 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 5287230 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||||||| | ||| || ||||||| || || |||||||| || || | Sbjct 5286078 CCAACTTCGGTCTGGACGCTGAGCTTGTCTCTCACTCGCGTATGCGCGGTCTGTCCGGTG 5286019 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | ||| | || |||| |||||| | || ||| ||||||| Sbjct 5286018 GTCAGCGTGTCAAGGTCGTCCTGTCTGCTTGCTC-GTGGCAGCGACCCCACTTGATCGTC 5285960 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 || ||||||||||||||||| ||||||| || || || |||||| Sbjct 5285959 CTTGACGAGCCTACCAACTACTTGGACCGTGACTCTCTCGGTGCTCTG 5285912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836628800933