Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 5e-19
>seq5
Length=5891385
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||||||||| || | | ||| || || | ||||| || || |||||||||||||| ||
Sbjct 1785135 ACCGCCACGGAGACGGAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCACT 1785076
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || || ||| || | || || ||||| |||| || ||||| |||||||| ||
Sbjct 1785075 CAGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 1785016
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| || || ||||| ||||| || | | || | ||||| | || |||||
Sbjct 1785015 GATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGATGACTCGAC 1784956
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | ||| || |||||||| || || || |||||||||||
Sbjct 1784955 TTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || || |||||||| |||
Sbjct 1784393 ATACCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1784334
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||||| ||| || || || || || || |||| || ||||| || |||||
Sbjct 1784333 GAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGG 1784274
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| || | | |||| ||| || | ||| |||
Sbjct 1784273 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCG 1784214
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 114385
|| || | || | || |||||||| || || || || || |||||||| ||
Sbjct 1784213 ACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATCGC 1784161
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || ||||| |||||||| ||
Sbjct 1784909 ATACCTCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTTTGGATGTTGTAGTCA 1784850
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || || || || || |||||||| ||||||||||||| ||||||||
Sbjct 1784849 GACAGGGTTCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGG 1784790
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | || | ||||| | || ||
Sbjct 1784789 GGGATTCCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATTGTGTCCGACGACTCA 1784730
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || || || || ||||| ||||||||
Sbjct 1784729 ACTTCCAATGTGATGGTCTTTCCCGTGAGGGTCTTGACAAAGATCTGCAT 1784680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134333434956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |