Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 116 9e-21
seq1 107 5e-18
seq6 93.3 1e-13
>seq5
Length=5891385
Score = 116 bits (128), Expect = 9e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || || || | ||| || || || || || |||||||
Sbjct 1784678 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAT 1784619
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || ||||| ||||| ||||||||||| ||| |||
Sbjct 1784618 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGGG 1784559
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || |||| || || || || || | ||| |||||| ||
Sbjct 1784558 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCACC 1784499
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
||||| ||||| ||||| ||||| || ||||||||||
Sbjct 1784498 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| || || ||||| || ||||||| |
Sbjct 1784390 CCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1784331
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || ||||| || |||||||| ||||| ||| || |||
Sbjct 1784330 AGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGA---TCCGGG 1784274
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || |||||||| || | || || || || || | ||| || ||
Sbjct 1784273 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTATCCGAGGACTCG 1784214
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 1784213 ACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 1784164
Score = 102 bits (112), Expect = 2e-16
Identities = 125/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || || || || || || |||||||| ||||| || |||
Sbjct 1785074 AGGGTGCGGCCATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 1785015
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || |||||||| || ||| || ||||| || || | || || || ||
Sbjct 1785014 ATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATCGTGTCTGATGACTCGAC 1784956
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct 1784955 TTCCAGCGTAATCGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 1784908
>seq1
Length=8787864
Score = 107 bits (118), Expect = 5e-18
Identities = 165/234 (71%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || |||| || || || ||||| || ||||||
Sbjct 8578498 CCACCACGGAGGCGCAGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 8578557
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||||||||| ||||| || || |||
Sbjct 8578558 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTG---GTCCGGG 8578614
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || |||||||| || | || || || || || | ||| || ||
Sbjct 8578615 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCC 8578674
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| || || ||||| ||||| || || || ||||||||||| ||||||||| ||
Sbjct 8578675 ACCTCAAGGGTGATAGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCATTTTG 8578728
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 269131 GACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAA 269190
|| ||| | || || || || |||| ||||| || | |||||||| || || || ||
Sbjct 4218883 GAGGCTCTGCCCTGCGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATTGAG 4218942
Query 269191 TTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAAT 269250
||||| || || ||| | || || ||||| | ||||| || ||| || | ||
Sbjct 4218943 TTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACGAGAAGGTCTACCGCTCCACCAAC 4219002
Query 269251 CCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGT 269310
||||||| ||| ||||| || || || | || ||||| ||||||||||| |||||
Sbjct 4219003 CCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGC 4219062
Query 269311 GTCAGCGACTATCAACGTCCTGGTGTAATGAA 269342
||| | ||||| ||| | ||||| |||||
Sbjct 4219063 GTCGGTGACTACCAAAAGGCCGGTGTCATGAA 4219094
>seq6
Length=3941639
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || ||||| |||||||||
Sbjct 189209 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATC 189268
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || ||||| || || || |||||||| || | || || || ||
Sbjct 189269 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 189328
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| || || || ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct 189329 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 189387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654203513814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |