Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-23 >seq1 Length=8787864 Score = 125 bits (138), Expect = 2e-23 Identities = 279/415 (67%), Gaps = 8/415 (2%) Strand=Plus/Plus Query 243345 TTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 243404 |||| | ||||||| ||| || ||| ||| |||||||||| || | || || Sbjct 4218684 TTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTGACCTTCTCCAA 4218743 Query 243405 CGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTAT-GTATTCAA 243463 |||| ||||| ||| |||||||| || ||| | |||| | |||| | || || Sbjct 4218744 CGAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTCGCTT-GCTTGTTGTTCTCTC 4218802 Query 243464 AGCTCCAGAACAAGCTACCATTC---GAAACGGTCAAACAAATCATCACAGAAGCAGTTG 243520 | ||| ||||| | || | || | ||| | | ||||| || || || | Sbjct 4218803 ACCTC---AACAACCGCCCCAGCAAGGAGATTGTCCAGAAGATCATTGTCGACGCTGTCG 4218859 Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580 | | ||| |||| ||| | ||| ||| | || ||| || | ||||||||||| Sbjct 4218860 AGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCCTGCGCTCTGCTCGGCATGAACTCCA 4218919 Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640 | |||||| |||||||| || ||||| |||||||| | || |||| || || | | Sbjct 4218920 ACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACG 4218979 Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700 |||| || ||| ||||| |||||||| | ||| |||||| ||| || || || | Sbjct 4218980 AGAAGGTCTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCA 4219039 Query 243701 AAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755 | || ||||||||||| ||||| ||| |||| || ||| | ||||| ||||| Sbjct 4219040 AGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCAAAAGGCCGGTGTCATGAA 4219094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879816301550