Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 1e-14
seq1 86.0 6e-12
>seq5
Length=5891385
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || || || | || || |||||||| |||
Sbjct 1784360 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGCTTTCCG 1784301
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || |||||||| || || ||||| ||||| || || || || || |||
Sbjct 1784300 GCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 1784241
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||| || || || || | ||| | |||||||||||| | ||
Sbjct 1784240 ACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTC 1784181
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 1784180 TTGACGAAGATCTGCAT 1784164
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || ||||| |||||||| || | | ||| || |||| || |||||||| ||
Sbjct 1784876 GTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCCAGCTGCTTACCA 1784817
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||| ||||||||||| || || ||||| || || || || || || |||
Sbjct 1784816 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGCTCTTC 1784757
Query 64367 ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424
|| || | ||| | ||| || || ||||| | || | |||||| || || | |
Sbjct 1784756 ACGTTGTCGATTGTGT--CCGACGACTCAACTTCCAATGTGATGGTCTTTCCCGTGAGGG 1784699
Query 64425 TTTTTACGAAAATTTGCAT 64443
| || || || || |||||
Sbjct 1784698 TCTTGACAAAGATCTGCAT 1784680
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || || || | || || || || ||||||||||| || |
Sbjct 1784679 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 1784620
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || ||||||||||| ||||| |||| || |||||||| || || ||
Sbjct 1784619 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGG 1784560
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || | |||||
Sbjct 1784559 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCAC 1784500
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|| | || | |||||| ||||| | || || ||||
Sbjct 1784499 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462
>seq1
Length=8787864
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| ||||| || || || |||||||| || | |||||| | ||
Sbjct 8578513 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 8578572
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | || || ||||||||||| || |||||||| || || ||
Sbjct 8578573 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 8578632
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | ||||| || | || | |||
Sbjct 8578633 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 8578692
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || | || || ||||| || ||||||||
Sbjct 8578693 TTACCCGTAAGGGTCTTGACGAAGATCTGCATTTT 8578727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644718807720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |