Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202 016-03-01] 13 sequences; 48,230,023 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 seq1 86.0 6e-12 >seq5 Length=5891385 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || || || | || || |||||||| ||| Sbjct 1784360 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCCTCGAGCTGCTTTCCG 1784301 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||| || || ||||| ||||| || || || || || ||| Sbjct 1784300 GCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 1784241 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| || || || || | ||| | |||||||||||| | || Sbjct 1784240 ACATTGTCAATGGTATCCGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGGGTC 1784181 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 1784180 TTGACGAAGATCTGCAT 1784164 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || | | ||| || |||| || |||||||| || Sbjct 1784876 GTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCCAGCTGCTTACCA 1784817 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| || || ||||| || || || || || || ||| Sbjct 1784816 GCAAAGATGAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGCTCTTC 1784757 Query 64367 ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424 || || | ||| | ||| || || ||||| | || | |||||| || || | | Sbjct 1784756 ACGTTGTCGATTGTGT--CCGACGACTCAACTTCCAATGTGATGGTCTTTCCCGTGAGGG 1784699 Query 64425 TTTTTACGAAAATTTGCAT 64443 | || || || || ||||| Sbjct 1784698 TCTTGACAAAGATCTGCAT 1784680 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || || || || ||||||||||| || | Sbjct 1784679 ACCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 1784620 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || ||||||||||| ||||| |||| || |||||||| || || || Sbjct 1784619 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGATCCGGGGG 1784560 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | ||||| Sbjct 1784559 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGATTCCAC 1784500 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 || | || | |||||| ||||| | || || |||| Sbjct 1784499 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 1784462 >seq1 Length=8787864 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| ||||| || || || |||||||| || | |||||| | || Sbjct 8578513 AGGACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 8578572 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || || ||||||||||| || |||||||| || || || Sbjct 8578573 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 8578632 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | || | ||| Sbjct 8578633 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 8578692 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || || | || || ||||| || |||||||| Sbjct 8578693 TTACCCGTAAGGGTCTTGACGAAGATCTGCATTTT 8578727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644718807720